Gene EcolC_2770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2770 
Symbol 
ID6064831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3039666 
End bp3040181 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content58% 
IMG OID641602176 
Productglycoside hydrolase family protein 
Protein accessionYP_001725725 
Protein GI170020771 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.206287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000183318 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAATCCAT CAATCATTAA ACGCTGCCTT GTCGGGGCCG TGCTGGCTAT TGCTGCCACG 
TTGCCGGGTT TTCAGCAGCT TCACACCTCC GTGGAGGGGC TGAAACTGAT TGCCGATTAC
GAAGGCTGTC GTCTGCAGCC GTATCAGTGC AGCGCGGGTG TCTGGACCGA TGGCATTGGT
AATACATCGG GCGTCATTCC CGGCAAAACC ATCACGGAAC GACAGGCAGC GGAAGGGCTG
ATCTCCAACG TGCTGCGTGT GGAGCGGGCG TTGGAAAGGT GTGTGAAGCA ACAGCCGCCG
CAGAAGGTGT ATGACGCTAC GGTGTCGTTT GCCTTCAACG TGGGGACGGG CAATGCCTGT
AGTTCCACGC TGGTGAAATT GCTCAATCAG CGGCGCTGGG CGGATGCGTG CCGACAGTTG
CCGCGCTGGG TTTATGTGAA AGGTGTTTTT AATCAGGGGC TGGATAACCG CCGTGCGCGG
GAGATGGCCT GGTGCCTTAA AGGAGCTGGA CTATGA
 
Protein sequence
MNPSIIKRCL VGAVLAIAAT LPGFQQLHTS VEGLKLIADY EGCRLQPYQC SAGVWTDGIG 
NTSGVIPGKT ITERQAAEGL ISNVLRVERA LERCVKQQPP QKVYDATVSF AFNVGTGNAC
SSTLVKLLNQ RRWADACRQL PRWVYVKGVF NQGLDNRRAR EMAWCLKGAG L