Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2770 |
Symbol | |
ID | 6064831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 3039666 |
End bp | 3040181 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641602176 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001725725 |
Protein GI | 170020771 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.206287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000183318 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATCCAT CAATCATTAA ACGCTGCCTT GTCGGGGCCG TGCTGGCTAT TGCTGCCACG TTGCCGGGTT TTCAGCAGCT TCACACCTCC GTGGAGGGGC TGAAACTGAT TGCCGATTAC GAAGGCTGTC GTCTGCAGCC GTATCAGTGC AGCGCGGGTG TCTGGACCGA TGGCATTGGT AATACATCGG GCGTCATTCC CGGCAAAACC ATCACGGAAC GACAGGCAGC GGAAGGGCTG ATCTCCAACG TGCTGCGTGT GGAGCGGGCG TTGGAAAGGT GTGTGAAGCA ACAGCCGCCG CAGAAGGTGT ATGACGCTAC GGTGTCGTTT GCCTTCAACG TGGGGACGGG CAATGCCTGT AGTTCCACGC TGGTGAAATT GCTCAATCAG CGGCGCTGGG CGGATGCGTG CCGACAGTTG CCGCGCTGGG TTTATGTGAA AGGTGTTTTT AATCAGGGGC TGGATAACCG CCGTGCGCGG GAGATGGCCT GGTGCCTTAA AGGAGCTGGA CTATGA
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Protein sequence | MNPSIIKRCL VGAVLAIAAT LPGFQQLHTS VEGLKLIADY EGCRLQPYQC SAGVWTDGIG NTSGVIPGKT ITERQAAEGL ISNVLRVERA LERCVKQQPP QKVYDATVSF AFNVGTGNAC SSTLVKLLNQ RRWADACRQL PRWVYVKGVF NQGLDNRRAR EMAWCLKGAG L
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