| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2739 |
|---|
| Symbol | |
|---|
| ID | 6065714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3013249 |
|---|
| End bp | 3014094 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641602145 |
|---|
| Product | putrescine transporter subunit: membrane component of ABC superfamily |
|---|
| Protein accession | YP_001725694 |
|---|
| Protein GI | 170020740 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.116908 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.55547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATT TACCGGTAAT TCGTTCGCCC TGGCGGATTG TGATTTTGCT GTTGGGCTTC
ACCTTTCTCT ACGCGCCAAT GCTGATGCTG GTGATCTATT CATTCAACAG CTCGAAACTG
GTGACGGTGT GGGCCGGCTG GTCAACGCGC TGGTATGGTG AGTTATTGCG CGATGACGCG
ATGATGAGTG CGGTTGGTTT AAGCCTGACA ATTGCTGCCT GTGCGGCAAC GGCGGCGGCG
ATCCTCGGGA CTATTGCGGC GGTGGTGCTG GTGCGCTTTG GCAGGTTTCG CGGATCAAAT
GGCTTTGCCT TTATGATCAC CGCGCCGCTG GTGATGCCAG ATGTCATCAC GGGCTTGTCG
CTGTTGTTGT TATTCGTCGC GCTTGCTCAT GCCATTGGCT GGCCTGCGGA CCGCGGGATG
CTTACCATCT GGCTGGCGCA TGTCACGTTC TGTACGGCTT ATGTGGCAGT CGTTATTTCG
TCGCGTCTGC GGGAACTGGA TAGCTCGATA GAAGAAGCAG CGATGGATCT CGGTGCGACG
CCGCTGAAAG TATTTTTCGT CATTACGCTA CCGATGATCA TGCCCGCGAT CATTTCTGGC
TGGTTACTGG CTTTTACTTT GTCGCTTGAT GATCTGGTGA TCGCCAGCTT TGTTTCTGGG
CCGGGAGCCA CCACGTTACC GATGCTGGTC TTTTCCAGCG TGCGGATGGG GGTGAATCCG
GAAATCAACG CCCTTGCAAC GTTAATTCTC GGTGCGGTCG GAATTGTCGG ATTTATCGCC
TGGTATCTGA TGGCTCGCGC AGAAAAACAG CGGATACGCG ATATCCAGCG TGCAAGACGT
GGCTGA
|
|---|
| Protein sequence | MNNLPVIRSP WRIVILLLGF TFLYAPMLML VIYSFNSSKL VTVWAGWSTR WYGELLRDDA
MMSAVGLSLT IAACAATAAA ILGTIAAVVL VRFGRFRGSN GFAFMITAPL VMPDVITGLS
LLLLFVALAH AIGWPADRGM LTIWLAHVTF CTAYVAVVIS SRLRELDSSI EEAAMDLGAT
PLKVFFVITL PMIMPAIISG WLLAFTLSLD DLVIASFVSG PGATTLPMLV FSSVRMGVNP
EINALATLIL GAVGIVGFIA WYLMARAEKQ RIRDIQRARR G
|
|---|
| |