Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2736 |
Symbol | |
ID | 6066159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3010603 |
End bp | 3011334 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641602142 |
Product | cationic amino acid ABC transporter, periplasmic binding protein |
Protein accession | YP_001725691 |
Protein GI | 170020737 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0318086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.950747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGT TAGTTCTTGC CGCTTTACTT GCTTCCTTTA CTTTCGGTGC TTCTGCCGCA GAGAAAATCA ATTTTGGCGT TTCAGCCACC TATCCCCCCT TTGAATCTAT AGGTGCTAAT AATGAGATTG TCGGCTTTGA TATCGATCTG GCAAAAGCCT TGTGCAAACA AATGCAGGCA GAATGTACTT TTACTAATCA CGCGTTCGAC AGCCTGATCC CGTCACTGAA ATTCAGAAAA TATGACGCCG TAATCTCCGG TATGGATATC ACGCCCGAGC GTAGCAAGCA GGTATCGTTT ACCACGCCCT ACTATGAAAA CTCAGCCGTC GTGATTGCCA AAAAAGATAC CTACAAAACG TTTGCCGATC TGAAAGGCAA ACGTATTGGG ATGGAAAACG GCACCACGCA CCAGAAATAT ATTCAGGATC AGCACCCCGA AGTGAAAACT GTCTCCTATG ACAGTTATCA GAATGCCTTT ATCGATCTGA AAAATGGTCG TATTGATGGG GTATTTGGTG ACACAGCGGT GGTAAACGAA TGGCTGAAAA CCAATCCGCA ACTGGGCGTT GCTACTGAAA AAGTGACCGA TCCGCAATAC TTCGGCACCG GTCTGGGCAT CGCTGTACGT CCGGATAACA AAGCTCTGCT GGAAAAACTG AATAACGCGC TGGCAGCAAT TAAAGCTGAC GGTACATATC AGAAAATCAA TGACCAGTGG TTCCCGCAGT AA
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Protein sequence | MKKLVLAALL ASFTFGASAA EKINFGVSAT YPPFESIGAN NEIVGFDIDL AKALCKQMQA ECTFTNHAFD SLIPSLKFRK YDAVISGMDI TPERSKQVSF TTPYYENSAV VIAKKDTYKT FADLKGKRIG MENGTTHQKY IQDQHPEVKT VSYDSYQNAF IDLKNGRIDG VFGDTAVVNE WLKTNPQLGV ATEKVTDPQY FGTGLGIAVR PDNKALLEKL NNALAAIKAD GTYQKINDQW FPQ
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