| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2728 |
|---|
| Symbol | |
|---|
| ID | 6064962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 3004454 |
|---|
| End bp | 3005503 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641602134 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001725683 |
|---|
| Protein GI | 170020729 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACGT TATTTTCTCA ACAACAGTGG ATTGATATGA AGGTACTGGT TACCGGCGCC
ACCAGCGGCT TAGGTCGAAA CGCGGTAGAG TTTTTATGCC AGAAAGGCAT CAGCGTGCGA
GCGACCGGTC GCAACGAGGC AATGGGCAAA TTGCTGGAAA AAATGGGCGC AGAGTTTGTT
CCGGCGGATC TGACCGAGCT GGTTTCATCA CAAGCTAAAG TGATGCTCGC GGGCATTGAT
ACGCTGTGGC ACTGCTCCAG CTTTACCTCA CCCTGGGGGA CACAACAGGC TTTCGATCTG
GCTAACGTTC GCGCCACTCG CCGCCTGGGT GAATGGGCTG TCGCCTGGGG TGTGCGTAAC
TTTATTCATA TCTCTTCCCC CTCCCTGTAC TTCGATTATC ACCACCATCG CGATATTAAA
GAAGATTTTC GCCCTCACCG CTTCGCCAAC GAGTTTGCCC GCAGCAAAGC AGCCAGCGAA
GAAGTGATCA ATATGCTTTC GCAGGCGAAT CCACAAACGC GCTTTACTAT TCTGCGCCCA
CAAAGTCTGT TCGGACCGCA CGATAAAGTC TTTATTCCCC GTCTGGCGCA TATGATGCAC
CACTACGGCA GTATTCTGTT ACCGCATGGC GGCAGTGCGC TGGTCGATAT GACCTACTAT
GAAAATGCCG TGCACGCAAT GTGGCTGGCA AGCCAGGAAG CCTGCGATAA GCTACCTTCC
GGGCGTGTGT ACAACATCAC CAACGGCGAG CATCGCACAC TGCGCAGCAT CGTGCAGAAG
CTGATCGACG AGTTGAATAT TGACTGTCGT ATTCGTTCCG TCCCCTACCC GATGCTGGAT
ATGATCGCCC GCAGCATGGA GCGTTTAGGC CGCAAGTCAG CAAAAGAGCC GCCGCTGACC
CACTACGGCG TCTCCAAGTT GAATTTTGAC TTTACGCTGG ATATTACGCG TGCGCAGGAA
GAGTTAGGTT ATCAGCCGGT CATCACCCTG GATGAAGGTA TCGAGAAAAC TGCCGCCTGG
CTACGCGACC ACGGAAAACT GCCGCGCTAA
|
|---|
| Protein sequence | MRTLFSQQQW IDMKVLVTGA TSGLGRNAVE FLCQKGISVR ATGRNEAMGK LLEKMGAEFV
PADLTELVSS QAKVMLAGID TLWHCSSFTS PWGTQQAFDL ANVRATRRLG EWAVAWGVRN
FIHISSPSLY FDYHHHRDIK EDFRPHRFAN EFARSKAASE EVINMLSQAN PQTRFTILRP
QSLFGPHDKV FIPRLAHMMH HYGSILLPHG GSALVDMTYY ENAVHAMWLA SQEACDKLPS
GRVYNITNGE HRTLRSIVQK LIDELNIDCR IRSVPYPMLD MIARSMERLG RKSAKEPPLT
HYGVSKLNFD FTLDITRAQE ELGYQPVITL DEGIEKTAAW LRDHGKLPR
|
|---|
| |