| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2717 |
|---|
| Symbol | |
|---|
| ID | 6067230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 2988951 |
|---|
| End bp | 2990897 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641602123 |
|---|
| Product | macrolide transporter ATP-binding /permease protein |
|---|
| Protein accession | YP_001725672 |
|---|
| Protein GI | 170020718 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCTT TGCTCGAATT AAAGGATATT CGTCGCAGCT ATCCTGCCGG TGATGAGCAG
GTTGAGGTGT TGAAGGGCAT CACCCTCGAT ATTTATGCTG GTGAGATGGT GGCGATTGTT
GGCGCTTCGG GTTCCGGTAA ATCGACCCTG ATGAATATTC TCGGCTGTCT GGATAAGGCC
ACCAGCGGCA CCTATCGCGT CGCCGGTCAG GATGTTGCCA CGCTGGACGC CGATGCGCTG
GCGCAACTGC GCCGCGAGCA TTTCGGCTTT ATTTTCCAGC GTTACCATTT GCTTTCGCAT
TTAACCGCCG AGCAGAACGT TGAAGTTCCC GCCGTCTATG CTGGTCTTGA GCGGAAACAG
CGGCTGCTTC GCGCCCAGGA GTTGCTGCAA CGGCTGGGGC TGGAAGACCG TACAGAGTAT
TATCCGGCAC AGCTTTCGGG TGGTCAGCAA CAGCGCGTCA GCATCGCGCG GGCATTGATG
AACGGCGGTC AGGTAATTCT TGCCGATGAA CCAACCGGCG CACTGGACAG CCATTCTGGC
GAAGAGGTGA TGGCGATCCT GCATCAGCTG CGCGATCGCG GGCATACGGT GATTATCGTC
ACCCACGATC CGCAGGTCGC TGCTCAGGCC GAGCGGGTGA TCGAAATTCG CGACGGCGAA
ATTGTGCGCA ATCCTCCCGC CATTGAAAAA GTGAATGTTG CTGGCGGGAC GGAGCCTGTT
GTCAACACGG TGTCTGGCTG GCGGCAGTTT GTCAGCGGTT TTAACGAGGC GCTGACGATG
GCATGGCGGG CGCTGGCAGC GAATAAAATG CGTACTTTAC TGACCATGCT GGGGATTATT
ATCGGTATTG CGTCGGTGGT TTCCATTGTC GTGGTGGGTG ACGCCGCCAA ACAAATGGTG
CTGGCGGATA TTCGTTCTAT TGGTACGAAT ACTATTGATG TCTATCCCGG GAAAGATTTT
GGCGATGACG ATCCGCAATA TCAACAGGCG CTGAAGTACG ACGACTTAAT CGCCATCCAA
AAACAACCGT GGGTCGCCTC AGCCACACCT GCCGTCTCGC AAAACCTGCG CCTGCGTTAT
AACAATGTTG ATGTTGCTGC CAGTGCCAAT GGCGTGAGCG GCGATTATTT TAATGTCTAT
GGCATGACCT TCAGTGAAGG GAACACCTTT AATCAGGAGC AGCTGAACGG TCGTGCGCAG
GTCGTGGTTC TCGACAGTAA TACTCGCCGC CAGCTTTTCC CCCATAAAGC AGATGTGGTT
GGCGAGGTGA TTCTGGTCGG CAATATGCCC GCCAGAGTCA TTGGTGTGGC GGAAGAAAAA
CAGTCGATGT TTGGTAGCAG TAAAGTGCTG CGTGTCTGGC TACCTTACAG CACGATGTCC
GGGCGAGTTA TGGGCCAGTC GTGGCTTAAC TCCATTACTG TCAGGGTGAA AGAAGGATTT
GACAGCGCCG AGGCGGAACA GCAACTCACG CGTTTACTTT CACTGCGCCA CGGAAAGAAG
GATTTCTTTA CCTGGAACAT GGACGGCGTC TTGAAAACTG TTGAAAAGAC CACACGTACT
TTACAACTGT TTCTGACGCT GGTGGCGGTG ATTTCGCTGG TGGTGGGCGG TATTGGTGTA
ATGAATATTA TGCTGGTGTC AGTGACCGAG CGGACGCGGG AAATTGGCAT TCGCATGGCT
GTAGGTGCGC GAGCAAGCGA TGTTTTGCAA CAGTTCCTGA TCGAAGCCGT ACTGGTTTGC
CTGGTCGGTG GCGCGTTGGG AATAACACTG TCACTGTTAA TTGCTTTCAC CTTGCAGCTT
TTCTTACCCG GCTGGGAGAT TGGTTTTTCA CCGTTGGCGC TGCTGCTGGC GTTTCTCTGC
TCGACGGTCA CCGGGATTTT ATTTGGCTGG TTACCCGCAC GAAATGCGGC ACGACTGGAT
CCAGTAGATG CTCTGGCACG AGAGTAA
|
|---|
| Protein sequence | MTPLLELKDI RRSYPAGDEQ VEVLKGITLD IYAGEMVAIV GASGSGKSTL MNILGCLDKA
TSGTYRVAGQ DVATLDADAL AQLRREHFGF IFQRYHLLSH LTAEQNVEVP AVYAGLERKQ
RLLRAQELLQ RLGLEDRTEY YPAQLSGGQQ QRVSIARALM NGGQVILADE PTGALDSHSG
EEVMAILHQL RDRGHTVIIV THDPQVAAQA ERVIEIRDGE IVRNPPAIEK VNVAGGTEPV
VNTVSGWRQF VSGFNEALTM AWRALAANKM RTLLTMLGII IGIASVVSIV VVGDAAKQMV
LADIRSIGTN TIDVYPGKDF GDDDPQYQQA LKYDDLIAIQ KQPWVASATP AVSQNLRLRY
NNVDVAASAN GVSGDYFNVY GMTFSEGNTF NQEQLNGRAQ VVVLDSNTRR QLFPHKADVV
GEVILVGNMP ARVIGVAEEK QSMFGSSKVL RVWLPYSTMS GRVMGQSWLN SITVRVKEGF
DSAEAEQQLT RLLSLRHGKK DFFTWNMDGV LKTVEKTTRT LQLFLTLVAV ISLVVGGIGV
MNIMLVSVTE RTREIGIRMA VGARASDVLQ QFLIEAVLVC LVGGALGITL SLLIAFTLQL
FLPGWEIGFS PLALLLAFLC STVTGILFGW LPARNAARLD PVDALARE
|
|---|
| |