| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2678 |
|---|
| Symbol | |
|---|
| ID | 6065401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 2938760 |
|---|
| End bp | 2939506 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641602084 |
|---|
| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
|---|
| Protein accession | YP_001725634 |
|---|
| Protein GI | 170020680 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
|---|
| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0830301 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.171534 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTG TGGTCATTAT TCCCGCGCGC TACGCGTCCA CGCGTCTGCC CGGTAAACCA
TTGGTTGATA TTAACGGCAA ACCCATGATT GTTCATGTTC TTGAACGCGC GCGTGAATCA
GGTGCCGAGC GCATCATCGT GGCAACCGAT CATGAGGATG TTGCCCGCGC CGTTGAAGCC
GCTGGCGGTG AAGTATGTAT GACGCGCGCC GATCATCAGT CAGGAACAGA ACGTCTGGCG
GAAGTTGTCG AAAAATGCGC ATTCAGCGAC GACACGGTGA TCGTTAATGT GCAGGGTGAT
GAACCGATGA TCCCTGCGAC AATCATTCGT CAGGTTGCTG ATAACCTCGC TCAGCGTCAG
GTGGGTATGG CGACTCTGGC GGTGCCAATC CACAATGCGG AAGAAGCGTT TAACCCGAAT
GCGGTGAAAG TGGTTCTCGA CGCTGAAGGG TATGCACTGT ACTTCTCTCG CGCCACCATT
CCTTGGGATC GTGATCGTTT TGCAGAAGGC CTTGAAACCG TTGGCGATAA CTTCCTGCGT
CATCTTGGTA TTTATGGCTA CCGTGCAGGC TTTATCCGTC GTTACGTCAA CTGGCAGCCA
AGTCCGTTAG AACACATCGA AATGTTAGAG CAGCTTCGTG TTCTGTGGTA CGGCGAAAAA
ATCCATGTTG CTGTTGCTCA GGAAGTTCCT GGCACAGGTG TGGATACCCC TGAAGATCTT
GAGCGCGTTC GCGCTGAAAT GCGCTAA
|
|---|
| Protein sequence | MSFVVIIPAR YASTRLPGKP LVDINGKPMI VHVLERARES GAERIIVATD HEDVARAVEA
AGGEVCMTRA DHQSGTERLA EVVEKCAFSD DTVIVNVQGD EPMIPATIIR QVADNLAQRQ
VGMATLAVPI HNAEEAFNPN AVKVVLDAEG YALYFSRATI PWDRDRFAEG LETVGDNFLR
HLGIYGYRAG FIRRYVNWQP SPLEHIEMLE QLRVLWYGEK IHVAVAQEVP GTGVDTPEDL
ERVRAEMR
|
|---|
| |