| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2658 |
|---|
| Symbol | |
|---|
| ID | 6066964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 2911952 |
|---|
| End bp | 2912491 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641602064 |
|---|
| Product | fimbrial protein |
|---|
| Protein accession | YP_001725614 |
|---|
| Protein GI | 170020660 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.959086 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00930832 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA GTGTATTGAC GGCGTTTATA ACTGTGGTAT GTGCAACGTC CAGCGTTATG
GCTGCTGATG ATAATGCTAT CACGGATGGC TCAGTAACAT TTAATGGTAA AGTTATTGCT
CCAGCTTGTA CCCTGGTAGC TGCGACGAAA GATTCCGTGG TGACTTTGCC AGATGTTAGT
GCCACGAAGT TGCAAACCAA TGGTCAGGTT TCTGGCGTGC AAATTGATGT GCCAATTGAA
TTAAAAGATT GTGATACTAC CGTAACAAAA AATGCAACGT TCACCTTTAA TGGCACTGCG
GATACTACTC AGATTACAGC GTTTGCTAAC CAGGCCTCAT CTGATGCTGC TACAAACGTG
GCCCTGCAAA TGTATATGAA TGATGGTACA ACGGCCATCA CGCCAGACAC AGAAACCGGG
AACATTTTGT TGCAGGATGG AGATCAGACG TTGACTTTTA AAGTTGATTA TATCGCTACG
GGGAAAGCGA CTTCAGGTAA TGTGAATGCG GTAACAAATT TCCATATTAA CTATTATTAA
|
|---|
| Protein sequence | MKKSVLTAFI TVVCATSSVM AADDNAITDG SVTFNGKVIA PACTLVAATK DSVVTLPDVS
ATKLQTNGQV SGVQIDVPIE LKDCDTTVTK NATFTFNGTA DTTQITAFAN QASSDAATNV
ALQMYMNDGT TAITPDTETG NILLQDGDQT LTFKVDYIAT GKATSGNVNA VTNFHINYY
|
|---|
| |