| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2657 |
|---|
| Symbol | |
|---|
| ID | 6067217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 2911168 |
|---|
| End bp | 2911869 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641602063 |
|---|
| Product | pili assembly chaperone |
|---|
| Protein accession | YP_001725613 |
|---|
| Protein GI | 170020659 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00954813 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTT GCATAACAAA GGGAATTGTG ACCGTAAGTT TAACGGCAAT ATTACTCAGC
TGCTCATCCG CATGGGCGGC AGGTAAAGGC GGGATTGGAC TTGCAGCAAC ACGTCTTGTT
TATTCAGAAG GTGAAGAGCA AATTTCACTG GGTGTACGTA ACACCAGTCC GGATGTTCCT
TATCTTATTC AGTCATGGGT GATGACCCCA GATAATAAAA AATCAGCAGA CTTTATTATT
ACACCACCGC TATTTGTGCT GAATCCGGCA AATGAGAATC TGTTACGCAT TATGTACATT
GGAGCGCCGT TGGCGAAAGA CAGAGAAACC CTTTTCTTCA CTAGCGTACG GGCAGTCCCT
TCAACAACGA AGCGGAAAGA GGGAAATACC CTGAAGATTG CCACACAAAG CGTCATCAAA
CTTTTCTGGC GACCAAAAGG TTTAGCGTAT CCCTTAGGCG AGGCTCCGGC GAAACTGCGT
TGCACTTCGT CAGCTGACAT GGTTACGGTC AGTAACCCAA CACCTTATTT CATTACCCTG
ACAGACCTGA AAATAGGTGG AAAAGTAGTT AAAAATCAAA TGATTTCCCC CTTTGATAAA
TACCAATTTT CTCTGCCAAA GGGGGCCAAA AATAGCAGCG TAACGTATCG AACCATCAAT
GACTACGGGG CGGAAACGCC GCAACTCAAC TGTAAATCGT AA
|
|---|
| Protein sequence | MKTCITKGIV TVSLTAILLS CSSAWAAGKG GIGLAATRLV YSEGEEQISL GVRNTSPDVP
YLIQSWVMTP DNKKSADFII TPPLFVLNPA NENLLRIMYI GAPLAKDRET LFFTSVRAVP
STTKRKEGNT LKIATQSVIK LFWRPKGLAY PLGEAPAKLR CTSSADMVTV SNPTPYFITL
TDLKIGGKVV KNQMISPFDK YQFSLPKGAK NSSVTYRTIN DYGAETPQLN CKS
|
|---|
| |