| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2625 |
|---|
| Symbol | |
|---|
| ID | 6066223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 2877103 |
|---|
| End bp | 2878221 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641602031 |
|---|
| Product | hydrogenase (NiFe) small subunit HydA |
|---|
| Protein accession | YP_001725582 |
|---|
| Protein GI | 170020628 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
|---|
| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.245904 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000111305 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACG AGGAAACATT TTACCAGGCC ATGCGGCGTC AGGGCGTTAC CCGGCGCAGC
TTTCTCAAAT ATTGTAGTCT GGCTGCCACG TCGCTGGGAT TAGGCGCGGG AATGGCACCA
AAGATTGCCT GGGCGCTGGA GAACAAACCC CGCATTCCGG TGGTATGGAT CCACGGTCTG
GAATGCACCT GCTGTACCGA ATCTTTTATC CGCTCCGCTC ACCCACTGGC GAAGGACGTC
ATCCTTTCCC TGATTTCCCT CGATTATGAC GATACCCTGA TGGCTGCCGC CGGAACCCAG
GCGGAAGAAG TCTTCGAAGA CATCATCACG CAATACAATG GCAAATATAT CCTCGCAGTA
GAAGGTAATC CGCCGCTGGG CGAGCAGGGG ATGTTCTGTA TCAGCAGCGG TCGACCGTTT
ATTGAGAAAC TCAAACGTGC CGCTGCCGGA GCCAGCGCGA TTATCGCCTG GGGAACCTGC
GCGTCCTGGG GCTGCGTGCA GGCCGCGCGG CCCAATCCGA CGCAGGCAAC GCCTATCGAC
AAAGTCATCA CCGACAAACC CATTATCAAA GTACCTGGCT GCCCGCCGAT CCCGGATGTG
ATGAGCGCCA TCATTACTTA CATGGTGACC TTTGATCGCT TGCCAGATGT CGACAGAATG
GGCCGTCCGC TGATGTTCTA TGGTCAGCGA ATCCACGATA AATGCTATCG CCGCGCCCAC
TTCGACGCCG GAGAGTTCGT CCAGAGTTGG GATGATGACG CTGCCCGCAA AGGTTACTGC
CTGTACAAAA TGGGCTGCAA AGGGCCTACC ACCTATAACG CCTGTTCCTC CACACGCTGG
AATGATGGCG TTTCTTTCCC AATCCAGTCT GGTCACGGCT GCCTGGGCTG TGCGGAAAAT
GGTTTCTGGG ATCGCGGTTC GTTCTACAGC CGCGTGGTCG ATATTCCGCA AATGGGTACT
CATTCCACCG CCGATACCGT CGGTTTAACC GCGCTTGGCG TGGTGGCAGC GGCTGTTGGT
GTGCACGCAG TCGCCAGCGC CGTTGACCAG CGCAGACGTC ATAACCAGCA ACCTACAGAA
ACCGAACATC AGCCAGGCAA TGAGGATAAA CAGGCATGA
|
|---|
| Protein sequence | MNNEETFYQA MRRQGVTRRS FLKYCSLAAT SLGLGAGMAP KIAWALENKP RIPVVWIHGL
ECTCCTESFI RSAHPLAKDV ILSLISLDYD DTLMAAAGTQ AEEVFEDIIT QYNGKYILAV
EGNPPLGEQG MFCISSGRPF IEKLKRAAAG ASAIIAWGTC ASWGCVQAAR PNPTQATPID
KVITDKPIIK VPGCPPIPDV MSAIITYMVT FDRLPDVDRM GRPLMFYGQR IHDKCYRRAH
FDAGEFVQSW DDDAARKGYC LYKMGCKGPT TYNACSSTRW NDGVSFPIQS GHGCLGCAEN
GFWDRGSFYS RVVDIPQMGT HSTADTVGLT ALGVVAAAVG VHAVASAVDQ RRRHNQQPTE
TEHQPGNEDK QA
|
|---|
| |