Gene EcolC_2602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2602 
Symbol 
ID6065036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2853767 
End bp2856481 
Gene Length2715 bp 
Protein Length904 aa 
Translation table11 
GC content54% 
IMG OID641602009 
Producthybrid sensory histidine kinase TorS 
Protein accessionYP_001725560 
Protein GI170020606 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02956] TMAO reductase sytem sensor TorS 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.417001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTTG CCCTGATGGC GCTGTTAACC CTGACCAGTA CCCTGGTGGG ATGGTACAAC 
CTGCGCTTTA TCAGCCAGGT GGAAAAAGAC AACACTCAGG CATTGATTCC TACCATGAAT
ATGGCGCGCC AGTTGAGCGA AGCCAGCGCC TGGGAACTTT TCGCCGCGCA GAACCTGACC
AGTGCCGATA ACGAAAAGAT GTGGCAGGCG CAGGGGCGAA TGCTCACCGC ACAAAGCCTG
AAGATTAATG CGTTGCTGCA AGCGTTACGG GAACAAGGTT TTGATACCAC CGCTATTGAA
CAACAGGAGC AGGAGATCTC CCGTTCGTTA CGTCAGCAAG GGGAACTGGT GGGGCAGCGT
TTGCAACTGC GCCAGCAACA ACAGCAACTC AGTCAGCAGA TAGTCGCTGC CGCCGATGAG
ATCGCACGCC TGGCGCAAGG TCAGGCGAAT AATGCGACAA CTTCCGCTGG AGCGACCCAG
GCCGGGATTT ACGATTTGAT CGAACAAGAT CAGCGTCAGG CTGCTGAAAG TGCACTCGAT
CGGCTGATTG ATATCGATCT TGAGTATGTT AACCAGATGA ATGAACTGCG CCTTAGCGCT
CTGCGGGTGC AGCAAATGGT GATGAATCTG GGGCTGGAGC AGATCCAGAA AAATGCACCA
ACGCTGGAAA AGCAGCTCAA TAATGCGGTG AAAATTCTGC AACGTCGGCA AATACGCATT
GAAGATCCGG GTGTTCGTGC GCAGGTCGCA ACAACGTTAA CTACCGTTAG CCAATATAGC
GATTTGCTGG CGCTGTATCA GCAGGACAGT GAAATCAGCA ATCACCTACA AACTCTCGCA
CAAAATAACA TCGCCCAGTT CGCGCAGTTT AGTAGCGAAG TCAGTCAGCT GGTCGACACC
ATTGAGCTGC GTAATCAGCA CGGACTGGCG CATCTGGAAA AAGCGAGTGC ACGCGGGCAA
TACAGCCTGT TATTGCTGGG GATGGTTTCA CTTTGCGCAC TGATTCTGAT CCTCTGGCGC
GTGGTTTATC GCTCAGTCAC GCGTCCACTT GCCGAACAAA CGCAGGCGCT GCAACGGCTG
CTGGACGGTG ATATTGACTC CCCTTTCCCG GAAACCGCTG GCGTACGGGA GCTGGATACC
ATCGGGCGGC TGATGGATGC GTTTCGCAGC AATGTTCATG CACTGAATCG CCACCGCGAA
CAGCTGGCGG CGCAGGTCAA AGCGCGTACA GCTGAATTGC AGGAACTGGT GATAGAACAC
CGACAGGCAC GGGCGGAAGC AGAAAAAGCC AGCCAGGCAA AATCGGCGTT TCTGGCGGCG
ATGAGCCATG AGATCCGCAC ACCGCTGTAC GGTATTCTCG GCACTGCTCA ACTGCTGGCA
GATAACCCCG CACTTAACGC CCAGCGTGAT GATTTGCGGG CAATTACTGA CTCTGGTGAA
TCGTTGCTGA CCATCCTCAA CGATATTCTC GATTATTCCG CTATCGAAGC AGGTGGCAAG
AATGTTTCGG TCAGCGATGA GCCCTTTGAA CCGCGCCCGC TGCTGGAAAG TACCCTGCAA
TTAATGAGCG GACGGGTGAA AGGTCGCCCG ATTCGCCTGG CAACGGCAAT TGCCGATGAT
ATGCCGTGCG CGTTAATGGG CGATCCACGA CGTATTCGTC AGGTTATAAC CAACCTGTTG
AGCAACGCCC TGCGTTTTAC TGACGAAGGG TACATTATCC TGCGTAGTCG CACTGATGGC
GAGCAATGGC TGGTCGAAGT GGAAGACAGC GGCTGCGGTA TTGATCCCGC GAAACTGGCA
GAAATCTTCC AGCCATTTGT GCAGGTAAGC GGCAAACGCG GCGGCACCGG GCTGGGACTG
ACTATCAGTA GCCGTCTGGC CCAGGCGATG GGCGGCGAAC TGAGCGCCAC CAGCACGCCG
GAGGTTGGAA GCTGTTTTTG TTTACGCTTG CCGTTACGTG TTGCCACGGC ACCCGTGCCA
AAAACAGTCA ATCAGGCGGT GCGTCTTGAC GGTTTACGTT TGCTGTTAAT TGAAGATAAC
CCGCTAACCC AGCGAATTAC CGTTGAGATG CTGAACACCA GTGGTGCGCA GGTTGTTGCT
GTTGGCAATG CCGCGCAGGC TTTAGAGACA CTGCAAAATA GCGAACCGTT TGCTGCCGCA
CTGGTGGATT TTGATCTGCC GGATGTCGAC GGCATTACGC TTGCCCGACA ACTGGCACAG
CAATATCCGT CGCTGGTTTT GATTGGCTTT AGCGCCCATG TCATTGACGA AACGCTGCGC
CAGCGTACCA GTTCATTATT CCGCGGGATT ATCCCTAAAC CGGTGCCGCG TGAAGTGCTC
GGTCAGTTAC TGGCGCACTA TCTCCAACTG CAAGTCAATA ACGATCAATC GCTGGATGTA
TCGCAACTCA ATGAAGATGC TCAGTTAATG GGGACGGAGA AGATCCACGA ATGGCTGGTA
TTATTTACAC AACATGCCCT GCCGCTTCTC GATGAAATCG ACATTGCCCG CGCCAGTCAG
GATAGCGAGA AAATAAAGCG TGCCGCGCAT CAGCTAAAAA GCAGTTGCTC GAGTCTGGGA
ATGCGTAGCG CCAGTCAGCT ATGCGCACAA CTGGAGCAGC AGCCATTATC TGCCCCCCTT
CCACACGAAG AAATTACATG CAGTGTTGCC GATCTGGAAG CATGGTTGAA TAAGAAAGAC
CTGAACGCGA TTTGA
 
Protein sequence
MGFALMALLT LTSTLVGWYN LRFISQVEKD NTQALIPTMN MARQLSEASA WELFAAQNLT 
SADNEKMWQA QGRMLTAQSL KINALLQALR EQGFDTTAIE QQEQEISRSL RQQGELVGQR
LQLRQQQQQL SQQIVAAADE IARLAQGQAN NATTSAGATQ AGIYDLIEQD QRQAAESALD
RLIDIDLEYV NQMNELRLSA LRVQQMVMNL GLEQIQKNAP TLEKQLNNAV KILQRRQIRI
EDPGVRAQVA TTLTTVSQYS DLLALYQQDS EISNHLQTLA QNNIAQFAQF SSEVSQLVDT
IELRNQHGLA HLEKASARGQ YSLLLLGMVS LCALILILWR VVYRSVTRPL AEQTQALQRL
LDGDIDSPFP ETAGVRELDT IGRLMDAFRS NVHALNRHRE QLAAQVKART AELQELVIEH
RQARAEAEKA SQAKSAFLAA MSHEIRTPLY GILGTAQLLA DNPALNAQRD DLRAITDSGE
SLLTILNDIL DYSAIEAGGK NVSVSDEPFE PRPLLESTLQ LMSGRVKGRP IRLATAIADD
MPCALMGDPR RIRQVITNLL SNALRFTDEG YIILRSRTDG EQWLVEVEDS GCGIDPAKLA
EIFQPFVQVS GKRGGTGLGL TISSRLAQAM GGELSATSTP EVGSCFCLRL PLRVATAPVP
KTVNQAVRLD GLRLLLIEDN PLTQRITVEM LNTSGAQVVA VGNAAQALET LQNSEPFAAA
LVDFDLPDVD GITLARQLAQ QYPSLVLIGF SAHVIDETLR QRTSSLFRGI IPKPVPREVL
GQLLAHYLQL QVNNDQSLDV SQLNEDAQLM GTEKIHEWLV LFTQHALPLL DEIDIARASQ
DSEKIKRAAH QLKSSCSSLG MRSASQLCAQ LEQQPLSAPL PHEEITCSVA DLEAWLNKKD
LNAI