Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2581 |
Symbol | putA |
ID | 6066504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 2830849 |
End bp | 2834811 |
Gene Length | 3963 bp |
Protein Length | 1320 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641601988 |
Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001725539 |
Protein GI | 170020585 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0830749 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACCA CCACCATGGG GGTTAAGCTG GACGACGCGA CGCGTGAGCG TATTAAGTCT GCCGCGACAC GTATCGATCG CACGCCACAC TGGTTAATTA AGCAGGCGAT TTTTTCTTAT CTCGAACAAC TGGAAAACAG CGATACTCTG CCGGAGCTAC CTGCGCTGCT TTCTGGCGCT GCCAATGAGA GCGATGAAGC ACCGACTCCG GCAGAGGAAC CACACCAACC ATTCCTCGAC TTTGCCGAGC AAATTTTGCC CCAGTCGGTT TCCCGCGCCG CGATCACAGC GGCCTATCGC CGCCCGGAAA CCGAAGCGGT TTCTATGCTG CTGGAACAAG CCCGCCTGCC GCAGCCAGTT GCTGAACAGG CGCACAAACT GGCGTATCAA CTGGCCGATA AACTGCGTAA TCAAAAAAAC GCCAGTGGTC GCGCAGGTAT GGTTCAGGGG TTATTGCAGG AGTTTTCGTT GTCATCGCAG GAAGGCGTGG CGCTGATGTG TCTGGCGGAA GCGTTGTTGC GTATTCCCGA CAAAGCCACC CGTGATGCGT TAATTCGCGA CAAAATCAGC AACGGTAACT GGCAGTCACA CATTGGTCGT AGCCCGTCAC TGTTTGTTAA TGCCGCCACC TGGGGGCTGC TGTTTACTGG CAAACTGGTT TCCACCCATA ACGAAGCCAG CCTCTCCCGC TCGCTGAACC GCATTATCGG TAAAAGCGGT GAACCGCTGA TCCGCAAAGG TGTGGATATG GCGATGCGCC TGATGGGCGA GCAGTTCGTC ACTGGCGAAA CCATCGCGGA AGCGTTAGCC AATGCCCGCA AGCTGGAAGA GAAAGGTTTC CGTTACTCTT ACGATATGCT TGGCGAAGCT GCACTGACTG CCGCAGATGC ACAAGCGTAT ATGGTTTCCT ATCAGCAGGC GATTCACGCC ATTGGTAAAG CGTCCAATGG TCGTGGCATC TATGAAGGTC CGGGCATTTC AATCAAGCTG TCGGCGCTGC ATCCGCGTTA CAGCCGCGCC CAGTATGACC GGGTAATGGA AGAGCTTTAC CCACGTCTGA AATCACTCAC CCTGCTGGCG CGTCAGTACG ATATTGGTAT CAACATTGAC GCCGAAGAGG CCGATCGTCT GGAGATCTCC CTCGATCTGC TGGAAAAACT CTGTTTCGAG CCTGAGCTGG CAGGCTGGAA CGGTATCGGT TTTGTTATTC AGGCTTATCA AAAACGCTGC CCACTGGTGA TTGATTACCT GATTGATCTC GCCACCCGCA GCCGTCGCCG TCTGATGATT CGCCTGGTGA AAGGCGCGTA CTGGGATAGT GAAATCAAGC GTGCGCAGAT GGACGGCCTT GAAGGCTATC CGGTTTATAC CCGCAAGGTG TATACCGACG TTTCATATCT CGCCTGTGCG AAAAAGCTGC TGGCGGTGCC GAATCTAATC TACCCGCAGT TCGCGACGCA CAACGCCCAT ACGCTGGCAG CGATTTATCA ACTGGCAGGT CAGAACTACT ATCCGGGTCA GTACGAGTTC CAGTGCCTGC ATGGTATGGG CGAGCCACTG TATGAGCAGG TCACCGGGAA AGTTGCCGAC GGCAAACTTA ACCGTCCGTG TCGTATTTAT GCTCCGGTCG GTACCCATGA AACGCTGTTG GCGTATCTGG TGCGTCGCCT GCTGGAAAAC GGTGCTAACA CCTCGTTTGT TAACCGTATT GCCGACACCT CTTTGCCACT GGATGAACTG GTCGCCGATC CGGTCACTGC TGTAGAAAAA CTGGCGCAAC AGGAAGGGCA AACTGGATTA CCGCATCCGA AAATTCCCCT GCCGCGCGAT CTTTACGGTC ACGGGCGCGA CAACTCGGCA GGGCTGGATC TCGCTAACGA ACACCGGCTG GCCTCGCTCT CTTCTGCCCT GCTCAATAGT GCACTGCAAA AATGGCAGGC CTTGCCAATG CTGGAACAAC CGGTAGCGGC AGGTGAGATG TCGCCCGTTA TTAACCCTGC GGAACCGAAA GATATTGTGG GCTTTGTGCG TGAAGCCACG CCGCGTGAGG TAGAACAGGC GCTGGAAAGT GCGGTTAATA ACGCGCCAAT CTGGTTTGCC ACTCCTCCGG TTGAACGCGC GGCGATTTTG CATCGCGCTG CCGTGCTAAT GGAAAGCCAG ATGCAGCAAC TGATTGGTAT TCTGGTGCGT GAAGCCGGAA AAACCTTCAG TAACGCCATT GCCGAAGTGC GCGAAGCGGT CGATTTTCTC CACTACTATG CCGGACAGGT GCGGGATGAT TTCGCTAACG AAACCCACCG TCCATTAGGG CCTGTGGTGT GTATCAGTCC GTGGAACTTC CCGCTGGCTA TTTTCACCGG GCAGATTGCT GCCGCACTGG CGGCAGGTAA CAGCGTGCTG GCAAAACCGG CAGAACAAAC GCCGCTGATT GCCGCGCAAG GGATCGCCAT TTTGCTGGAA GCGGGTGTAC CGCCAGGCGT GGTGCAGTTG CTGCCAGGTC AGGGGGAAAC CGTGGGCGCG CAACTGACGG GTGATGATCG CGTACGCGGG GTGATGTTTA CCGGTTCAAC CGAAGTCGCT ACGTTACTGC AGCGCAATAT CGCCAGCCGC CTGGACGCTC AGGGTCGCCC TATTCCGCTC ATCGCTGAAA CCGGCGGCAT GAACGCGATG ATTGTCGATT CTTCAGCACT GACCGAACAA GTAGTAATAG ATGTGCTGGC CTCGGCGTTC GACAGTGCGG GTCAGCGTTG TTCGGCGCTG CGCGTGCTGT GCCTGCAAGA TGAGATTGCC GACCACACGT TGAAAATGCT GCGCGGCGCA ATGGCCGAAT GCCGGATGGG TAATCCGGGT CGCCTGACCA CCGATATCGG TCCGGTGATT GATAGCGAAG CGAAAGTCAA TATTGAGCGC CATATTCAGA CCATGCGTAG CAAAGGCCGT CCGGTGTTCC AGGCGGTGCG GGAAAACAGT GAAGATGCCC GTGAATGGCA AAGCGGCACC TTTGTCGCCC CGACGCTGAT CGAACTGGAT GACTTTGCCG AATTGCAAAA AGAGGTCTTT GGTCCGGTGC TGCATGTGGT GCGTTACAAC CGTAACCAGC TACCAGAGCT GATCGAGCAG ATTAACGCTT CCGGTTATGG TCTGACGCTT GGCGTCCATA CGCGTATTGA TGAAACTATC GCCCAGGTCA CTGGCTCGGC CCATGTTGGT AACCTGTATG TTAACCGTAA TATGGTGGGC GCAGTGGTTG GTGTGCAGCC GTTCGGCGGC GAAGGGTTGT CCGGTACCGG GCCGAAAGCA GGCGGTCCGC TCTATCTCTA CCGTCTGCTG GCGAATCGCC CGGAAAGTGC GCTGGCAGTA ACGCTCGCGC GTCAGGATGC AGAGTATCCG GTCGATGCGC AGTTGAAAGC CGCATTGACT CAGCCGCTAA ATGCACTGCG GGAATGGGCA GCAAATCGTC CAGAATTGCA GGCGTTATGT ACGCAATATG GCGAGCTGGC GCAGGCAGGA ACACAACGAT TGCTGCCGGG GCCGACGGGT GAACGCAACA CCTGGACGCT GCTGCCGCGT GAGCGCGTGT TGTGTATTGC CGATGATGAG CAGGATGCGC TGACTCAGCT CGCCGCCGTG CTGGCGGTGG GCAGCCAGGT ACTGTGGCCG GATGACGCGC TGCATCGTCA GTTAGTGAAG GCATTGCCAT CGGCAGTCAG CGAACGTATT CAACTGGCGA AAGCGGAAAA TATAACCGCT CAACCGTTTG ATGCGGTGAT CTTCCACGGT GATTCGGATC AGCTTCGCGC ATTGTGTGAA GCCGTTGCTG CGCGGGATGG CGCAATTGTT TCGGTGCAGG GTTTTGCCCG TGGCGAAAGC AATATCCTTC TGGAACGGCT GTATATCGAG CGTTCGCTGA GTGTGAATAC CGCTGCCGCT GGCGGTAACG CCAGCTTAAT GACTATAGGT TAA
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Protein sequence | MGTTTMGVKL DDATRERIKS AATRIDRTPH WLIKQAIFSY LEQLENSDTL PELPALLSGA ANESDEAPTP AEEPHQPFLD FAEQILPQSV SRAAITAAYR RPETEAVSML LEQARLPQPV AEQAHKLAYQ LADKLRNQKN ASGRAGMVQG LLQEFSLSSQ EGVALMCLAE ALLRIPDKAT RDALIRDKIS NGNWQSHIGR SPSLFVNAAT WGLLFTGKLV STHNEASLSR SLNRIIGKSG EPLIRKGVDM AMRLMGEQFV TGETIAEALA NARKLEEKGF RYSYDMLGEA ALTAADAQAY MVSYQQAIHA IGKASNGRGI YEGPGISIKL SALHPRYSRA QYDRVMEELY PRLKSLTLLA RQYDIGINID AEEADRLEIS LDLLEKLCFE PELAGWNGIG FVIQAYQKRC PLVIDYLIDL ATRSRRRLMI RLVKGAYWDS EIKRAQMDGL EGYPVYTRKV YTDVSYLACA KKLLAVPNLI YPQFATHNAH TLAAIYQLAG QNYYPGQYEF QCLHGMGEPL YEQVTGKVAD GKLNRPCRIY APVGTHETLL AYLVRRLLEN GANTSFVNRI ADTSLPLDEL VADPVTAVEK LAQQEGQTGL PHPKIPLPRD LYGHGRDNSA GLDLANEHRL ASLSSALLNS ALQKWQALPM LEQPVAAGEM SPVINPAEPK DIVGFVREAT PREVEQALES AVNNAPIWFA TPPVERAAIL HRAAVLMESQ MQQLIGILVR EAGKTFSNAI AEVREAVDFL HYYAGQVRDD FANETHRPLG PVVCISPWNF PLAIFTGQIA AALAAGNSVL AKPAEQTPLI AAQGIAILLE AGVPPGVVQL LPGQGETVGA QLTGDDRVRG VMFTGSTEVA TLLQRNIASR LDAQGRPIPL IAETGGMNAM IVDSSALTEQ VVIDVLASAF DSAGQRCSAL RVLCLQDEIA DHTLKMLRGA MAECRMGNPG RLTTDIGPVI DSEAKVNIER HIQTMRSKGR PVFQAVRENS EDAREWQSGT FVAPTLIELD DFAELQKEVF GPVLHVVRYN RNQLPELIEQ INASGYGLTL GVHTRIDETI AQVTGSAHVG NLYVNRNMVG AVVGVQPFGG EGLSGTGPKA GGPLYLYRLL ANRPESALAV TLARQDAEYP VDAQLKAALT QPLNALREWA ANRPELQALC TQYGELAQAG TQRLLPGPTG ERNTWTLLPR ERVLCIADDE QDALTQLAAV LAVGSQVLWP DDALHRQLVK ALPSAVSERI QLAKAENITA QPFDAVIFHG DSDQLRALCE AVAARDGAIV SVQGFARGES NILLERLYIE RSLSVNTAAA GGNASLMTIG
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