| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2580 |
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| Symbol | |
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| ID | 6067279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 2828918 |
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| End bp | 2830426 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641601987 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_001725538 |
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| Protein GI | 170020584 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0213742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATTA GCACACCGAT GTTGGTGACA TTTTGTGTCT ATATCTTTGG CATGATATTG
ATTGGGTTTA TCGCCTGGCG ATCAACGAAA AACTTTGACG ACTATATTCT GGGCGGTCGT
AGCCTTGGGC CATTCGTGAC GGCATTATCG GCGGGTGCGT CGGATATGAG CGGCTGGCTG
TTAATGGGGT TGCCGGGCGC GGTTTTTCTT TCCGGGATTT CCGAAAGTTG GATCGCCATT
GGCCTGACAT TAGGCGCGTG GATCAACTGG AAGCTGGTGG CGGGGCGGTT GCGTGTGCAT
ACCGAATACA ACAATAACGC CTTAACATTG CCGGATTATT TCACCGGGCG CTTTGAAGAT
AAAAGCCGCA TTTTGCGCAT TATCTCCGCG CTGGTGATTT TGCTGTTCTT CACCATTTAT
TGCGCTTCGG GCATTGTGGC AGGCGCGCGT CTGTTTGAAA GTACCTTTGG CATGAGCTAC
GAAACGGCTC TGTGGGCGGG AGCTGCGGCG ACGATCCTTT ACACCTTTAT TGGCGGTTTC
CTCGCGGTGA GCTGGACTGA CACTGTACAG GCCAGCCTGA TGATTTTTGC CCTGATCCTG
ACGCCGGTTA TCGTCATTAT CAGTGTCGGT GGCTTTGGTG ACTCGCTGGA AGTGATCAAA
CAAAAGAGCA TCGAAAACGT TGATATGCTC AAAGGGCTGA ACTTTGTCGC CATTATCTCA
CTGATGGGTT GGGGGCTGGG TTACTTCGGG CAACCGCACA TCCTGGCGCG TTTTATGGCG
GCAGACTCTC ACCACAGCAT TGTCCATGCG CGTCGTATCA GTATGACCTG GATGATCCTC
TGCCTGGCAG GGGCGGTAGC TGTCGGCTTC TTTGGTATTG CTTACTTTAA TGAGCACCCG
GCGGTAGCAG GTGCGGTAAA CCAGAATGCT GAGCGCGTGT TTATCGAACT GGCGCAAATT
CTGTTTAACC CGTGGATTGC CGGGATTCTG CTGTCGGCAA TTCTGGCGGC GGTAATGTCA
ACCTTAAGTT GCCAGCTGCT GGTGTGCTCC AGTGCGATTA CCGAAGATTT ATACAAAGCG
TTTCTGCGTA AACATGCCAG CCAGAAAGAG CTGGTGTGGG TAGGTCGTGT GATGGTGCTG
GTGGTGGCGC TGGTGGCCAT TGCGCTGGCG GCAAACCCGG AAAACCGTGT GCTGGGGCTA
GTGAGCTATG CGTGGGCAGG CTTTGGCGCG GCGTTTGGTC CGGTGGTGCT GTTCTCGGTG
ATGTGGTCAC GCATGACGCG CAACGGTGCG CTGGCGGGGA TGATCATCGG GGCGCTGACG
GTTATCGTCT GGAAACAGTT CGGCTGGCTG GGACTGTACG AAATTATTCC GGGCTTTATC
TTCAGCAGTA TTGGGATTGT AGTGTTTAGT TTGCTGGGTA AAGCGCCGTC AGCGGCGATG
CAAAAACGCT TTGCCGAGGC CGATGCGCAC TATCATTCGG CTCCGCCGTC ACGGTTGCAG
GAAAGCTAA
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| Protein sequence | MAISTPMLVT FCVYIFGMIL IGFIAWRSTK NFDDYILGGR SLGPFVTALS AGASDMSGWL
LMGLPGAVFL SGISESWIAI GLTLGAWINW KLVAGRLRVH TEYNNNALTL PDYFTGRFED
KSRILRIISA LVILLFFTIY CASGIVAGAR LFESTFGMSY ETALWAGAAA TILYTFIGGF
LAVSWTDTVQ ASLMIFALIL TPVIVIISVG GFGDSLEVIK QKSIENVDML KGLNFVAIIS
LMGWGLGYFG QPHILARFMA ADSHHSIVHA RRISMTWMIL CLAGAVAVGF FGIAYFNEHP
AVAGAVNQNA ERVFIELAQI LFNPWIAGIL LSAILAAVMS TLSCQLLVCS SAITEDLYKA
FLRKHASQKE LVWVGRVMVL VVALVAIALA ANPENRVLGL VSYAWAGFGA AFGPVVLFSV
MWSRMTRNGA LAGMIIGALT VIVWKQFGWL GLYEIIPGFI FSSIGIVVFS LLGKAPSAAM
QKRFAEADAH YHSAPPSRLQ ES
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