Gene EcolC_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2562 
Symbol 
ID6064810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2808228 
End bp2809061 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content50% 
IMG OID641601968 
Productcurli production assembly/transport component CsgG 
Protein accessionYP_001725520 
Protein GI170020566 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.25398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCT TATTTCTTTT GGTTGCCGTC ATGTTACTGA GCGGATGCTT AACCGCCCCG 
CCTAAAGAAG CCGCCAGACC GACATTAATG CCTCGTGCTC AGAGCTACAA AGATTTGACC
CATCTGCCAG CGCCGACGGG TAAAATCTTT GTTTCGGTAT ACAACATTCA GGACGAAACC
GGGCAATTTA AACCCTACCC GGCAAGTAAC TTCTCCACTG CTGTTCCGCA AAGCGCCACG
GCAATGCTGG TCACGGCACT GAAAGATTCT CGCTGGTTTA TACCGCTGGA GCGCCAGGGC
TTACAAAACC TGCTTAACGA GCGCAAGATT ATTCGTGCGG CACAAGAAAA CGGCACGGTT
GCCATTAATA ACCGAATCCC GCTGCAATCT TTAACGGCGG CAAATATCAT GGTTGAAGGT
TCGATTATCG GTTATGAAAG CAACGTCAAA TCTGGCGGGG TTGGGGCAAG ATATTTTGGC
ATCGGTGCCG ACACGCAATA CCAGCTCGAT CAGATTGCCG TGAACCTGCG CGTCGTCAAT
GTGAGTACCG GCGAGATCCT TTCTTCGGTG AACACCAGTA AGACGATACT TTCCTATGAA
GTTCAGGCCG GGGTTTTCCG CTTTATTGAC TACCAGCGCT TGCTTGAAGG GGAAGTGGGT
TACACCTCGA ACGAACCTGT TATGCTGTGC CTGATGTCGG CTATCGAAAC AGGGGTCATT
TTCCTGATTA ATGATGGTAT CGACCGTGGT CTGTGGGATT TGCAAAATAA AGCAGAACGG
CAGAATGACA TTCTGGTGAA ATACCGCCAT ATGTCGGTTC CACCGGAATC CTGA
 
Protein sequence
MQRLFLLVAV MLLSGCLTAP PKEAARPTLM PRAQSYKDLT HLPAPTGKIF VSVYNIQDET 
GQFKPYPASN FSTAVPQSAT AMLVTALKDS RWFIPLERQG LQNLLNERKI IRAAQENGTV
AINNRIPLQS LTAANIMVEG SIIGYESNVK SGGVGARYFG IGADTQYQLD QIAVNLRVVN
VSTGEILSSV NTSKTILSYE VQAGVFRFID YQRLLEGEVG YTSNEPVMLC LMSAIETGVI
FLINDGIDRG LWDLQNKAER QNDILVKYRH MSVPPES