Gene EcolC_2538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2538 
Symbol 
ID6066465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2787302 
End bp2788348 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content53% 
IMG OID641601944 
Productdihydroorotase 
Protein accessionYP_001725496 
Protein GI170020542 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0418] Dihydroorotase 
TIGRFAM ID[TIGR00856] dihydroorotase, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.223191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.326474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAC CATCCCAGGT ATTAAAGATC CGCCGCCCAG ACGACTGGCA CCTTCACCTC 
CGCGATGGCG ACATGTTAAA AACTGTCGTG CCGTATACCA GCGAAATTTA TGGACGGGCT
ATCGTAATGC CCAATCTGGC TCCGCCCGTG ACCACCGTTG AGGCTGCCGT GGCGTATCGC
CAGCGTATTC TTGATGCCGT ACCTGCCGGG CACGATTTCA CCCCATTGAT GACCTGTTAT
TTAACAGATT CGCTGGATCC TAATGAGCTG GAGCGCGGAT TTAACGAAGG CGTGTTCACC
GCTGCAAAAC TTTACCCGGC AAACGCAACC ACTAACTCCA GCCACGGCGT TACGTCAGTT
GACGCAATCA TGCCGGTACT TGAGCGCATG GAAAAAATCG GTATGCCGCT ACTGGTGCAT
GGTGAAGTGA CACATGCAGA TATCGACATT TTTGATCGTG AAGCGCGCTT TATAGAAAGC
GTGATGGAAC CGCTGCGCCA GCGCCTGACT GCACTGAAAG TCGTTTTTGA ACACATCACC
ACCAAAGACG CAGCCGACTA TGTCCGTGAC GGAAATGAAC GGCTGGCTGC CACCATCACT
CCGCAGCATC TGATGTTTAA CCGCAACCAT ATGCTGGTTG GTGGCGTGCG TCCGCACCTG
TATTGTTTAC CCATCCTCAA ACGCAATATT CACCAACAGG CATTGCGTGA ACTGGTCGCC
AGCGGTTTTA ATCGAGTATT CCTCGGTACG GATTCTGCGC CACATGCACG TCATCGCAAA
GAGAGCAGTT GCGGCTGCGC GGGCTGCTTC AACGCCCCAA CCGCGCTGGG CAGTTACGCT
ACCGTCTTTG AAGAGATGAA TGCTCTGCAG CACTTTGAAG CATTCTGTTC TGTAAACGGC
CCGCAGTTCT ATGGCTTGCC GGTCAACGAC ACATTCATCG AACTGGTACG TGAAGAGCAA
CAGGTTGCTG AAAGCATCGC ACTGACTGAT GACACCCTGG TGCCATTCCT CGCCGGGGAA
ACGGTACGCT GGTCCGTTAA ACAATAA
 
Protein sequence
MTAPSQVLKI RRPDDWHLHL RDGDMLKTVV PYTSEIYGRA IVMPNLAPPV TTVEAAVAYR 
QRILDAVPAG HDFTPLMTCY LTDSLDPNEL ERGFNEGVFT AAKLYPANAT TNSSHGVTSV
DAIMPVLERM EKIGMPLLVH GEVTHADIDI FDREARFIES VMEPLRQRLT ALKVVFEHIT
TKDAADYVRD GNERLAATIT PQHLMFNRNH MLVGGVRPHL YCLPILKRNI HQQALRELVA
SGFNRVFLGT DSAPHARHRK ESSCGCAGCF NAPTALGSYA TVFEEMNALQ HFEAFCSVNG
PQFYGLPVND TFIELVREEQ QVAESIALTD DTLVPFLAGE TVRWSVKQ