Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2525 |
Symbol | flgD |
ID | 6067473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 2777359 |
End bp | 2778054 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641601931 |
Product | flagellar basal body rod modification protein |
Protein accession | YP_001725483 |
Protein GI | 170020529 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.414017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00818545 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCCATTG CGGTAACCAC CACCGATCCG ACAAATACCG GCGTCAGTAC CACCAGCAGT AGTTCGCTCA CGGGCAGCAA CGCCGCAGAT TTACAAAGCA GTTTTCTGAC TTTGCTGGTG GCGCAGCTGA AAAACCAGGA CCCGACCAAT CCAATGGAAA ACAACGAGCT GACGTCGCAA TTGGCACAAA TCAGCACGGT CAGCGGGATT GAAAAACTCA ATACCACGCT CGGCTCTATT TCCGGACAGA TTGATAACAG CCAGTCGTTA CAGGCCAGTA ACCTGATCGG TCACGGCGTG ATGATCCCCG GCACCACTGT TCTTGCGGGA ACCGGTAGTG AAGAAGGGGC TGTGACCACG ACCACGCCGT TTGGTGTTGA GCTGCAACAG GCGGCAGACA AAGTTACGGC CACCATCACC GATAAAAATG GCGCGGTTGT GCGCACCATT GATATTGGTG AACTGACCGC CGGAGTCCAC AGTTTCACTT GGGACGGTAC GTTGACTGAC GGCAGCACTG CGCCGAACGG TTCTTACAAC GTAGCGATTA GCGCCAGTAA CGGTGGTACA CAATTGGTTG CCCAGCCGCT GCAGTTTGCT CTGGTGCAGG GTGTGATCCG CGGCAACAAC GGTAATACGC TGGATCTCGG CACTTACGGC ACCACCACCC TCGACGAAGT ACGGCAGATA ATTTAA
|
Protein sequence | MSIAVTTTDP TNTGVSTTSS SSLTGSNAAD LQSSFLTLLV AQLKNQDPTN PMENNELTSQ LAQISTVSGI EKLNTTLGSI SGQIDNSQSL QASNLIGHGV MIPGTTVLAG TGSEEGAVTT TTPFGVELQQ AADKVTATIT DKNGAVVRTI DIGELTAGVH SFTWDGTLTD GSTAPNGSYN VAISASNGGT QLVAQPLQFA LVQGVIRGNN GNTLDLGTYG TTTLDEVRQI I
|
| |