Gene EcolC_2494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2494 
Symbol 
ID6067647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2744787 
End bp2745812 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content53% 
IMG OID641601900 
Productbeta-hexosaminidase 
Protein accessionYP_001725452 
Protein GI170020498 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.566967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000031052 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGTCCAG TAATGTTGGA TGTCGAAGGT TACGAACTGG ACGCGGAAGA GCGTGAAATA 
CTGGCGCATC CGCTGGTGGG AGGGCTGATT CTCTTTACGC GTAACTATCA TGATCCTGCC
CAGTTACGTG AACTGGTGCG CCAGATCCGC GCAGCTTCGC GCAATCATCT GGTGGTGGCG
GTTGATCAGG AAGGTGGACG CGTGCAGCGT TTTCGTGAAG GTTTTACCCG CTTGCCAGCG
GCGCAATCAT TCGCTGCGCT GTCAGGAATG GAAGAGGGTG GCAAACTGGC GCAGGAGGCA
GGTTGGTTGA TGGCCAGCGA AATGATCGCT ATGGATATTG ATATCAGCTT TGCGCCTGTG
CTGGATGTCG GGCATATCAG CGCGGCGATT GGCGAGCGTT CTTATCATGC CGATCCACAA
AAAGCCCTGG CAATTGCCAG CCGGTTTATT GATGGTATGC ATGAAGCCGG AATGAAAACG
ACCGGGAAAC ACTTCCCAGG ACACGGTGCA GTAACGGCAG ACTCACACAA AGAAACACCG
TGCGATCCAC GTCCACAAGC GGAGATTCGC GCTAAAGATA TGTCGGTCTT CAGTTCCTTA
ATCCGCGAAA ATAAACTCGA CGCCATTATG CCTGCGCATG TGATCTACAG TGATGTTGAT
CCGCGTCCGG CGAGCGGCTC TCCCTACTGG CTGAAAACCG TTTTGCGTCA GGAACTGGGT
TTTGACGGCG TGATTTTCTC TGACGATTTA TCGATGGAAG GTGCCGTGAT TATGGGCAGT
TATGCCGAAC GCGGGCAGGC ATCACTGGAT GCGGGTTGCG ATATGATCCT GGTCTGCAAT
AATCGTAAAG GGGCCGTCAG CGTGTTAGAT AATCTGTCAC CGATCAAGGC AGAACGTGTT
ACACGTTTGT ATCATAAAGG TTCATTTTCG CGACAGGAAC TGATGGACTC GGCTCGCTGG
AAAGCGATCA GCGCCCGTCT GAATCAGTTA CATGAACGCT GGCAGGAAGA GAAAGCAGGT
CACTAA
 
Protein sequence
MGPVMLDVEG YELDAEEREI LAHPLVGGLI LFTRNYHDPA QLRELVRQIR AASRNHLVVA 
VDQEGGRVQR FREGFTRLPA AQSFAALSGM EEGGKLAQEA GWLMASEMIA MDIDISFAPV
LDVGHISAAI GERSYHADPQ KALAIASRFI DGMHEAGMKT TGKHFPGHGA VTADSHKETP
CDPRPQAEIR AKDMSVFSSL IRENKLDAIM PAHVIYSDVD PRPASGSPYW LKTVLRQELG
FDGVIFSDDL SMEGAVIMGS YAERGQASLD AGCDMILVCN NRKGAVSVLD NLSPIKAERV
TRLYHKGSFS RQELMDSARW KAISARLNQL HERWQEEKAG H