Gene EcolC_2490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2490 
Symbol 
ID6064862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand+ 
Start bp2741050 
End bp2741682 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content51% 
IMG OID641601896 
ProductTetR family transcriptional regulator 
Protein accessionYP_001725448 
Protein GI170020494 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones4 
Fosmid unclonability p-value0.0000804693 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACTG ACTCAACACA ATGTGTAAAA AAAAGCCGTG GCCGCCCAAA AGTGTTCGAC 
AGGGATGCCG CGCTTGATAA GGCCATGAAA TTGTTCTGGC AACACGGTTA TGAAGCGACT 
TCTCTTGCGG ACCTCGTCGA AGCGACCGGA GCCAAAGCGC CCACGCTATA CGCGGAATTT 
ACCAACAAAG AGGGGTTATT TCGTGCCGTT CTCGACCGCT ATATCGATCG TTTTGCCGCT 
AAGCATGAAG CACAGCTGTT TTGTGAAGAG AAAAGCGTGG AGTCTGCGCT GGCTGACTAT 
TTTGCTGCCA TCGCCAACTG CTTTACCAGC AAAGACACCC CGGCAGGCTG CTTCATGATC 
AACAACTGCA CCACCCTCTC CCCAGATTCA GGAGATATCG CCAATACGTT GAAATCACGC 
CATGCGATGC AAGAGCGCAC TTTGCAGCAG TTTTTATGTC AACGACAAGC GCGCGGGGAA 
ATCCCGACCC ACTGTGACGT GACACATCTG GCAGAATTCC TTAATTGTAT TATTCAGGGG 
ATGTCGATCA GCGCACGCGA AGGTGCATCG CTGGAAAAAC TAATGCAGAT TGCCGGAACG 
ACTTTGCGTT TATGGCCCGA ACTGGTGAAA TAA
 
Protein sequence
MATDSTQCVK KSRGRPKVFD RDAALDKAMK LFWQHGYEAT SLADLVEATG AKAPTLYAEF 
TNKEGLFRAV LDRYIDRFAA KHEAQLFCEE KSVESALADY FAAIANCFTS KDTPAGCFMI 
NNCTTLSPDS GDIANTLKSR HAMQERTLQQ FLCQRQARGE IPTHCDVTHL AEFLNCIIQG 
MSISAREGAS LEKLMQIAGT TLRLWPELVK