Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2480 |
Symbol | potD |
ID | 6066170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 2728339 |
End bp | 2729385 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641601886 |
Product | spermidine/putrescine ABC transporter periplasmic substrate-binding protein |
Protein accession | YP_001725438 |
Protein GI | 170020484 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0199988 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.415461 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT GGTCACGCCA CCTGCTCGCG GCGGGTGCTC TGGCACTGGG CATGAGCGCC GCTCACGCCG ATGACAACAA CACGCTGTAT TTCTACAACT GGACCGAGTA CGTGCCGCCA GGACTGCTTG AACAGTTCAC CAAAGAAACC GGTATTAAGG TTATCTATTC GACTTACGAG TCGAACGAAA CCATGTATGC CAAGCTGAAA ACGTACAAAG ACGGTGCCTA TGACCTGGTG GTTCCTTCAA CCTATTACGT CGATAAAATG CGTAAAGAAG GGATGATCCA GAAGATCGAC AAGTCGAAGT TAACGAACTT CAGCAATCTC GATCCAGACA TGCTCAATAA GCCGTTTGAC CCGAATAACG ATTACTCCAT TCCGTATATC TGGGGTGCGA CGGCGATTGG TGTTAACGGT GATGCGGTGG ATCCGAAATC TGTCACCAGC TGGGCCGATC TGTGGAAGCC TGAGTACAAA GGCAGCCTGC TGTTGACCGA CGATGCCCGT GAAGTGTTCC AGATGGCGCT GCGTAAGCTG GGCTACTCCG GTAACACCAC CGATCCGAAA GAGATTGAAG CTGCATATAA TGAGCTGAAA AAACTGATGC CAAACGTCGC AGCGTTTAAC TCCGATAACC CAGCTAACCC GTACATGGAA GGCGAAGTTA ACCTCGGCAT GATCTGGAAC GGTTCTGCTT TCGTTGCACG GCAGGCGGGT ACGCCAATTG ACGTGGTGTG GCCGAAAGAA GGCGGCATTT TCTGGATGGA CAGCCTGGCG ATCCCGGCAA ATGCCAAAAA CAAAGAAGGC GCGCTGAAAT TGATCAACTT CCTGCTGCGC CCGGATGTGG CAAAACAGGT TGCTGAAACT ATCGGTTATC CAACGCCAAA CCTTGCGGCG CGTAAGCTGT TAAGTCCGGA AGTGGCGAAC GATAAAACGC TCTACCCGGA TGCTGAAACC ATTAAAAATG GCGAATGGCA GAATGACGTT GGCGCAGCCA GCAGCATTTA TGAAGAGTAT TATCAGAAGC TGAAAGCAGG ACGTTAA
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Protein sequence | MKKWSRHLLA AGALALGMSA AHADDNNTLY FYNWTEYVPP GLLEQFTKET GIKVIYSTYE SNETMYAKLK TYKDGAYDLV VPSTYYVDKM RKEGMIQKID KSKLTNFSNL DPDMLNKPFD PNNDYSIPYI WGATAIGVNG DAVDPKSVTS WADLWKPEYK GSLLLTDDAR EVFQMALRKL GYSGNTTDPK EIEAAYNELK KLMPNVAAFN SDNPANPYME GEVNLGMIWN GSAFVARQAG TPIDVVWPKE GGIFWMDSLA IPANAKNKEG ALKLINFLLR PDVAKQVAET IGYPTPNLAA RKLLSPEVAN DKTLYPDAET IKNGEWQNDV GAASSIYEEY YQKLKAGR
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