Gene EcolC_2473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2473 
Symbol 
ID6067624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2720721 
End bp2721392 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content48% 
IMG OID641601879 
ProductDNA-binding transcriptional regulator PhoP 
Protein accessionYP_001725431 
Protein GI170020477 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.751348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTAC TGGTTGTTGA AGACAATGCG TTGTTACGTC ACCACCTTAA AGTTCAGATT 
CAGGATGCTG GTCATCAGGT CGATGACGCA GAAGATGCCA AAGAAGCCGA TTATTATCTC
AATGAACATA TACCGGATAT TGCGATTGTC GATCTCGGAT TGCCAGACGA GGACGGTCTG
TCACTGATTC GCCGCTGGCG TAGCAACGAT GTTTCACTGC CGATTCTGGT ATTAACCGCC
CGTGAAAGCT GGCAGGACAA AGTCGAAGTA TTAAGTGCCG GTGCTGATGA TTATGTGACT
AAACCGTTTC ATATTGAAGA GGTGATGGCG CGAATGCAGG CATTAATGCG GCGTAATAGC
GGTCTGGCTT CACAGGTCAT TTCGCTCCCC CCGTTTCAGG TTGATCTCTC TCGCCGTGAA
TTATCTATTA ATGACGAAGT GATCAAACTG ACCGCGTTCG AATACACCAT TATGGAAACG
TTGATACGCA ATAATGGCAA AGTGGTGAGC AAAGATTCGT TAATGCTACA ACTCTATCCG
GATGCGGAGC TGCGGGAAAG CCATACCATT GATGTACTGA TGGGACGTCT GCGCAAAAAA
ATTCAGGCAC AATATCCGCA AGAAGTGATT ACCACCGTTC GCGGCCAGGG CTATCTGTTC
GAATTGCGCT GA
 
Protein sequence
MRVLVVEDNA LLRHHLKVQI QDAGHQVDDA EDAKEADYYL NEHIPDIAIV DLGLPDEDGL 
SLIRRWRSND VSLPILVLTA RESWQDKVEV LSAGADDYVT KPFHIEEVMA RMQALMRRNS
GLASQVISLP PFQVDLSRRE LSINDEVIKL TAFEYTIMET LIRNNGKVVS KDSLMLQLYP
DAELRESHTI DVLMGRLRKK IQAQYPQEVI TTVRGQGYLF ELR