Gene EcolC_2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2472 
Symbol 
ID6064721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2719182 
End bp2720552 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content52% 
IMG OID641601878 
Productadenylosuccinate lyase 
Protein accessionYP_001725430 
Protein GI170020476 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTAT CCTCACTGAC CGCCGTTTCC CCTGTCGATG GACGCTACGG CGATAAAGTC 
AGCGCGCTGC GCGGGATTTT CAGCGAATAT GGTTTGCTGA AATTCCGTGT ACAAGTTGAA
GTACGTTGGC TGCAAAAACT GGCCGCGCAC GCAGCGATCA AGGAAGTTCC TGCTTTTGCT
GCCGACGCAA TCGGTTACCT TGATGCAATC GTCGCCAGTT TCAGCGAAGA AGATGCGGCG
CGCATCAAAA CTATCGAGCG TACCACTAAC CACGACGTTA AAGCGGTTGA GTATTTCCTG
AAAGAAAAAG TGGCGGAGAT CCCGGAACTG CACGCGGTTT CTGAATTCAT CCACTTTGCC
TGTACTTCGG AAGATATCAA TAACCTCTCC CACGCATTAA TGCTGAAAAC CGCGCGTGAT
GAAGTGATCC TGCCATACTG GCGTCAACTG ATTGATGGCA TTAAAGATCT CGCCGTTCAG
TATCGCGATA TCCCGCTGCT GTCTCGTACC CACGGTCAGC CAGCCACGCC GTCAACCATC
GGTAAAGAGA TGGCAAACGT CGCCTACCGT ATGGAGCGCC AGTACCGCCA GCTTAACCAG
GTGGAGATCC TCGGCAAAAT CAACGGCGCG GTCGGTAACT ATAACGCCCA CATCGCCGCT
TACCCGGAAG TTGACTGGCA TCAGTTCAGC GAAGAGTTCG TCACCTCGCT GGGTATTCAG
TGGAACCCGT ACACCACCCA GATCGAACCG CACGACTACA TTGCCGAACT GTTTGATTGC
GTTGCGCGCT TCAACACTAT TCTGATCGAC TTTGACCGTG ACGTCTGGGG TTATATCGCC
CTTAACCACT TCAAACAGAA AACCATTGCT GGTGAGATTG GTTCTTCCAC CATGCCGCAT
AAAGTTAACC CGATCGACTT CGAAAACTCC GAAGGGAATC TGGGCCTTTC CAACGCGGTA
TTGCAGCATC TGGCAAGCAA ACTGCCGGTT TCCCGCTGGC AGCGTGACCT GACCGACTCT
ACCGTGCTGC GTAACCTCGG CGTGGGTATC GGTTATGCCT TGATTGCATA TCAATCCACC
CTGAAAGGCG TGAGCAAACT GGAAGTGAAC CGTGACCATC TGCTGGATGA ACTGGATCAC
AACTGGGAAG TGCTGGCTGA ACCAATCCAG ACAGTTATGC GTCGCTATGG CATCGAAAAA
CCGTACGAGA AGCTGAAAGA GCTGACTCGC GGTAAGCGCG TTGACGCCGA AGGCATGAAG
CAGTTTATCG ATGGTCTGGC GTTGCCAGAA GAAGAGAAAG CCCGCCTGAA AGCGATGACG
CCGGCTAACT ATATTGGTCG AGCTATCACG ATGGTTGATG AGCTGAAATA A
 
Protein sequence
MELSSLTAVS PVDGRYGDKV SALRGIFSEY GLLKFRVQVE VRWLQKLAAH AAIKEVPAFA 
ADAIGYLDAI VASFSEEDAA RIKTIERTTN HDVKAVEYFL KEKVAEIPEL HAVSEFIHFA
CTSEDINNLS HALMLKTARD EVILPYWRQL IDGIKDLAVQ YRDIPLLSRT HGQPATPSTI
GKEMANVAYR MERQYRQLNQ VEILGKINGA VGNYNAHIAA YPEVDWHQFS EEFVTSLGIQ
WNPYTTQIEP HDYIAELFDC VARFNTILID FDRDVWGYIA LNHFKQKTIA GEIGSSTMPH
KVNPIDFENS EGNLGLSNAV LQHLASKLPV SRWQRDLTDS TVLRNLGVGI GYALIAYQST
LKGVSKLEVN RDHLLDELDH NWEVLAEPIQ TVMRRYGIEK PYEKLKELTR GKRVDAEGMK
QFIDGLALPE EEKARLKAMT PANYIGRAIT MVDELK