| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2468 |
|---|
| Symbol | |
|---|
| ID | 6067650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 2716217 |
|---|
| End bp | 2716870 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641601874 |
|---|
| Product | 23S rRNA pseudouridine synthase E |
|---|
| Protein accession | YP_001725426 |
|---|
| Protein GI | 170020472 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCAAT TCATAATCTC TGAAAATACC ATGCAAAAAA CTTCTTTTAG AAATCACCAG
GTTAAGCGAT TCAGCTCGCA ACGTTCTACC AGGCGTAAAC CTGAAAACCA GCCCACGCGT
GTGATCCTGT TCAATAAACC CTACGATGTT CTTCCGCAGT TCACCGATGA AGCCGGACGC
AAAACATTAA AAGAATTCAT CCCGGTTCAG GGCGTTTATG CAGCAGGTCG CCTTGACCGC
GATAGCGAAG GGTTGCTGGT GCTGACCAAT AACGGCGCGT TGCAGGCGCG TTTAACCCAG
CCGGGTAAAC GCACCGGAAA AATCTATTAT GTGCAGGTGG AAGGTATTCC CACACAAGAC
GCACTTGAAG CCTTGCGCAA TGGCGTAACC TTAAATGATG GCCCTACCCT GCCCGCCGGC
GCGGAGCTGG TTGACGAACC CGCGTGGTTA TGGCCGCGGA ATCCACCAAT TCGTGAACGC
AAAAGTATTC CCACCAGCTG GCTGAAGATC ACCTTATATG AAGGACGTAA TCGCCAGGTG
CGCCGCATGA CCGCCCATGT TGGCTTCCCC ACGCTGCGAC TGATTCGCTA TGCGATGGGT
GATTACTCTT TGGATAATCT TGCCAATGGC GAATGGCGAG AAGTGACAGA TTAA
|
|---|
| Protein sequence | MRQFIISENT MQKTSFRNHQ VKRFSSQRST RRKPENQPTR VILFNKPYDV LPQFTDEAGR
KTLKEFIPVQ GVYAAGRLDR DSEGLLVLTN NGALQARLTQ PGKRTGKIYY VQVEGIPTQD
ALEALRNGVT LNDGPTLPAG AELVDEPAWL WPRNPPIRER KSIPTSWLKI TLYEGRNRQV
RRMTAHVGFP TLRLIRYAMG DYSLDNLANG EWREVTD
|
|---|
| |