Gene EcolC_2411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2411 
Symbol 
ID6066544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2656588 
End bp2657442 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content52% 
IMG OID641601820 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_001725372 
Protein GI170020418 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 
TIGRFAM ID[TIGR01362] 3-deoxy-8-phosphooctulonate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000254452 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACAAA AAGTGGTTAG CATTGGCGAC ATCAACGTAG CAAATGACCT GCCGTTCGTA 
CTGTTTGGCG GTATGAACGT GTTGGAATCT CGCGATCTGG CGATGCGCAT TTGCGAGCAC
TACGTAACTG TGACCCAGAA ACTGGGTATC CCTTACGTGT TCAAAGCCTC TTTTGACAAA
GCCAACCGCT CCTCCATCCA CTCTTATCGT GGACCGGGCC TGGAAGAAGG GATGAAAATC
TTCCAGGAGT TGAAGCAGAC TTTTGGCGTG AAAATTATCA CCGACGTTCA CGAACCAAGT
CAGGCACAGC CCGTTGCTGA TGTCGTGGAT GTGATTCAGT TGCCGGCGTT TCTTGCTCGC
CAGACTGACC TGGTTGAAGC CATGGCGAAA ACCGGTGCGG TAATTAACGT CAAGAAACCA
CAGTTTGTCA GCCCGGGACA GATGGGTAAT ATCGTTGATA AATTCAAAGA AGGCGGCAAC
GAAAAAGTGA TTCTTTGCGA TCGCGGTGCT AACTTCGGCT ATGACAACCT GGTTGTCGAT
ATGCTGGGCT TCAGCATTAT GAAGAAAGTG TCTGGTAACT CGCCGGTGAT TTTCGACGTG
ACCCACGCAC TGCAATGCCG CGATCCGTTT GGCGCAGCTT CCGGTGGTCG TCGTGCTCAG
GTGGCTGAGC TGGCACGAGC CGGTATGGCG GTAGGTCTGG CGGGGCTGTT TATTGAAGCG
CATCCGGATC CGGAACATGC GAAATGTGAT GGTCCATCCG CGCTGCCGCT GGCTAAACTG
GAACCGTTCC TCAAGCAGAT GAAAGCGATT GATGATCTGG TGAAAGGTTT CGAAGAACTG
GATACCAGCA AGTAA
 
Protein sequence
MKQKVVSIGD INVANDLPFV LFGGMNVLES RDLAMRICEH YVTVTQKLGI PYVFKASFDK 
ANRSSIHSYR GPGLEEGMKI FQELKQTFGV KIITDVHEPS QAQPVADVVD VIQLPAFLAR
QTDLVEAMAK TGAVINVKKP QFVSPGQMGN IVDKFKEGGN EKVILCDRGA NFGYDNLVVD
MLGFSIMKKV SGNSPVIFDV THALQCRDPF GAASGGRRAQ VAELARAGMA VGLAGLFIEA
HPDPEHAKCD GPSALPLAKL EPFLKQMKAI DDLVKGFEEL DTSK