Gene EcolC_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2392 
Symbol 
ID6066321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2634173 
End bp2635186 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content49% 
IMG OID641601794 
Productresponse regulator of RpoS 
Protein accessionYP_001725353 
Protein GI170020399 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000237009 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCAGC CATTGGTCGG AAAACAGATT CTCATTGTTG AAGATGAGCA GGTATTTCGC 
TCGCTTCTGG ATTCATGGTT TTCCTCATTG GGAGCGACAA CGGTACTGGC GGCTGATGGG
GTGGATGCCC TTGAGTTGCT GGGAGGTTTC ACTCCAGACC TGATGATATG TGATATCGCG
ATGCCACGAA TGAACGGGCT TAAACTGCTG GAGCATATAC GTAACAGAGG CGACCAGACC
CCAGTTCTGG TGATATCTGC CACTGAAAAT ATGGCAGATA TTGCCAAAGC GTTACGTCTG
GGCGTTGAAG ATGTTTTGCT GAAACCAGTT AAAGATCTGA ATCGCTTGCG CGAGATGGTT
TTTGCCTGTC TCTATCCCAG CATGTTTAAT TCGCGCGTTG AGGAAGAGGA AAGGCTTTTT
CGCGACTGGG ATGCAATGGT TGATAACCCT GCCGCAGCGG CGAAATTATT ACAGGAACTA
CAACCGCCGG TTCAGCAGGT GATTTCCCAT TGCCGGGTTA ATTATCGTCA ATTGGTTGCC
GCGGACAAAC CCGGCCTGGT GCTTGATATT GCCGCACTTT CGGAAAACGA TCTGGCATTT
TATTGCCTTG ATGTCACCCG AGCTGGACAT AATGGCGTAC TTGCTGCCTT GTTATTACGC
GCATTGTTTA ACGGATTATT ACAGGAACAG CTTGCACACC AAAATCAACG GTTGCCAGAG
TTGGGCGCGT TATTGAAGCA GGTAAACCAT TTACTTCGTC AGGCCAATCT GCCGGGGCAG
TTTCCGCTAT TAGTTGGCTA TTATCATCGC GAACTGAAAA ATCTCATTCT GGTTTCTGCG
GGTCTGAATG CGACGTTAAA TACCGGCGAA CACCAGGTGC AAATCAGTAA TGGTGTTCCG
TTAGGCACTT TAGGTAACGC TTATTTGAAT CAATTGAGCC AGCGATGCGA TGCCTGGCAA
TGCCAAATAT GGGGAACCGG TGGTCGACTG CGCTTGATGT TGTCTGCAGA ATGA
 
Protein sequence
MTQPLVGKQI LIVEDEQVFR SLLDSWFSSL GATTVLAADG VDALELLGGF TPDLMICDIA 
MPRMNGLKLL EHIRNRGDQT PVLVISATEN MADIAKALRL GVEDVLLKPV KDLNRLREMV
FACLYPSMFN SRVEEEERLF RDWDAMVDNP AAAAKLLQEL QPPVQQVISH CRVNYRQLVA
ADKPGLVLDI AALSENDLAF YCLDVTRAGH NGVLAALLLR ALFNGLLQEQ LAHQNQRLPE
LGALLKQVNH LLRQANLPGQ FPLLVGYYHR ELKNLILVSA GLNATLNTGE HQVQISNGVP
LGTLGNAYLN QLSQRCDAWQ CQIWGTGGRL RLMLSAE