| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2342 |
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| Symbol | |
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| ID | 6067351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 2582282 |
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| End bp | 2583031 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641601745 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001725304 |
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| Protein GI | 170020350 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.148271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000344058 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAATTCCC GACAACAAAC TATTCTACAG ATGGTCATTG ACCAGGGTCA GGTTAGCGTA
ACCGATCTGG CAAAAGCCAC TGGAGTTTCT GAAGTTACCA TTCGCCAGGA TCTCAACACA
CTCGAAAAAC TGAGTTACCT CCGCCGTGCA CATGGCTTTG CTGTTTCGCT TGATAGTGAT
GACGTCGAAA CCCGTATGAT GAGCAACTAT ACGCTGAAGC GTGAACTCGC CGAGTTTGCC
GCGTCGCTGG TTCAACCGGG CGAAACCATC TTTATCGAAA ATGGCAGCAG CAATGCCCTA
CTCGCCCGGA CTCTGGGCGA GCAGAAGAAA AATGTCACTA TCATCACGGT CAGCAGCTAC
ATCGCGCATT TGCTGAAAGA CGCGCCTTGT GAAGTTATTT TGCTCGGTGG CGTGTATCAG
AAAAAAAGCG AAAGTATGGT TGGCCCTTTG ACACGCCAGT GCATCCAACA GGTGCATTTC
AGCAAAGCAT TTATTGGTAT TGATGGCTGG CAACCTGAAA CTGGATTTAC CGGTCGCGAT
ATGATGCGTA CCGATGTGGT CAATGCCGTG CTGGAAAAAG AGTGCGAAGC GATAGTCCTG
ACTGACAGCT CGAAATTTGG TGCTGTACAT TCATACTCCA TCGGTCCCGT TGAGCGATTC
AATCGCGTGA TTACCGATTC GAAAATACGC GCCAGCGATC TGATGCATCT TGAGCACAGT
AAACTCACCG TTCACGTCGT TGACATTTAA
|
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| Protein sequence | MNSRQQTILQ MVIDQGQVSV TDLAKATGVS EVTIRQDLNT LEKLSYLRRA HGFAVSLDSD
DVETRMMSNY TLKRELAEFA ASLVQPGETI FIENGSSNAL LARTLGEQKK NVTIITVSSY
IAHLLKDAPC EVILLGGVYQ KKSESMVGPL TRQCIQQVHF SKAFIGIDGW QPETGFTGRD
MMRTDVVNAV LEKECEAIVL TDSSKFGAVH SYSIGPVERF NRVITDSKIR ASDLMHLEHS
KLTVHVVDI
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