| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2327 |
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| Symbol | puuD |
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| ID | 6065753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 2564747 |
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| End bp | 2565511 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641601730 |
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| Product | gamma-glutamyl-gamma-aminobutyrate hydrolase |
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| Protein accession | YP_001725289 |
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| Protein GI | 170020335 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2071] Predicted glutamine amidotransferases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAATA TAATGAACAA TCCGGTTATC GGTGTCGTAA TGTGCAGGAA CAGGCTTAAG
GGTCATGCGA CCCAGACTCT GCAAGAAAAG TACCTGAATG CCATCATCCA CGCAGGCGGC
TTGCCAATTG CGTTACCACA TGCGCTGGCG GAACCGTCAT TACTTGAACA ACTTTTGCCG
AAACTCGATG GCATTTATCT TCCTGGTAGT CCCAGCAATG TGCAGCCGCA CCTATATGGT
GAAAACGGCG ATGAGCCTGA CGCCGATCCC GGGCGTGATC TTCTGAGCAT GGCGTTAATT
AATGCCGCAC TCGAAAGGCG CATCCCCATT TTCGCCATCT GCCGGGGTTT ACAGGAACTG
GTGGTGGCAA CCGGTGGTTC GTTGCATCGC AAGCTGTGCG AACAGCCTGA ATTGCTGGAA
CATCGGGAAG ATCCCGAACT GCCGGTGGAA CAGCAATATG CACCGTCGCA TGAAGTTCAG
GTTGAAGAGG GGGGATTACT GTCTGCGTTG TTACCTGAAT GTAGCAACTT TTGGGTAAAC
TCTCTGCATG GACAAGGGGC GAAGGTCGTT AGCCCACGGT TGCGTGTTGA AGCTCGCTCG
CCGGATGGCT TAGTTGAGGC GGTTAGCGTC ATCAATCATC CTTTTGCGCT GGGCGTACAG
TGGCACCCGG AATGGAACAG TAGCGAGTAC GCGCTTTCGC GTATATTGTT CGAGGGCTTT
ATCACCGCTT GTCAGCACCA TATCGCTGAA AAACAGCGAC TCTGA
|
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| Protein sequence | MENIMNNPVI GVVMCRNRLK GHATQTLQEK YLNAIIHAGG LPIALPHALA EPSLLEQLLP
KLDGIYLPGS PSNVQPHLYG ENGDEPDADP GRDLLSMALI NAALERRIPI FAICRGLQEL
VVATGGSLHR KLCEQPELLE HREDPELPVE QQYAPSHEVQ VEEGGLLSAL LPECSNFWVN
SLHGQGAKVV SPRLRVEARS PDGLVEAVSV INHPFALGVQ WHPEWNSSEY ALSRILFEGF
ITACQHHIAE KQRL
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