Gene EcolC_2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2300 
Symbol 
ID6066945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2536735 
End bp2537700 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content54% 
IMG OID641601703 
Productmandelate racemase/muconate lactonizing protein 
Protein accessionYP_001725262 
Protein GI170020308 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.467318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCG TTAAGGTATT TGAGGAAGCC TGGCCCTTAC ATACCCCGTT TGTGATTGCC 
CGGGGAAGTC GCAGTGAAGC GCGCGTGGTG GTGGTTGAAC TGGAAGAAGA GGGTATTAAA
GGCACCGGCG AATGCACGCC GTATCCGCGT TATGGAGAAA GTGATGCCTC GGTAATGGCG
CAAATTATGA GCGTCGTGTC GCAATTAGAG AAAGGGCTGA CACGGGAGGA GTTGCAAAAA
ATTCTCCCTG CCGGCGCAGC ACGTAATGCG CTGGATTGTG CATTGTGGGA TCTGGCCGCG
CGAAAACAGC AGCAATCGCT GGCTGATTTG ATCGGCATAA CGCTTCCCGA GACAGTTATC
ACTGCACAGA CGGTAGTCAT CGGTACGCCT GATCAGATGG CCAATAGTGC ATCAACACTC
TGGCAGGCAG GCGCGAAATT ACTGAAAGTG AAGCTGGATA ACCATCTTAT TAGTGAGCGG
ATGGTGGCAA TTCGCACAGC TGTGCCCGAT GCGACGCTGA TCGTTGATGC AAATGAATCC
TGGCGTGCAG AAGGGTTGGC GGCGCGTTGC CAGCTATTGG CGGATTTAGG CGTTGCGATG
CTTGAACAAC CCCTTCCTGC GCAGGACGAT GCGGCGCTGG AGAATTTTAT TCATCCGTTG
CCGATTTGTG CTGATGAGAG TTGTCATACT CGTAGCAATT TGAAGGCGCT GAAAGGGCGC
TATGAGATGG TTAACATTAA GCTCGATAAA ACCGGTGGTC TGACGGAAGC GCTGGCGCTG
GCGACTGAAG CGCGTGCACA AGGTTTCAGT CTGATGCTGG GCTGCATGTT GTGTACCTCT
CGTGCCATTA GCGCCGCTTT ACCGCTGGTG CCGCAGGTCA GTTTCGCCGA TCTTGACGGA
CCGACCTGGC TGGCGGTAGA TGTGGAACCG GCGCTTCAGT TCACGACGGG CGAATTGCAT
CTTTAG
 
Protein sequence
MRTVKVFEEA WPLHTPFVIA RGSRSEARVV VVELEEEGIK GTGECTPYPR YGESDASVMA 
QIMSVVSQLE KGLTREELQK ILPAGAARNA LDCALWDLAA RKQQQSLADL IGITLPETVI
TAQTVVIGTP DQMANSASTL WQAGAKLLKV KLDNHLISER MVAIRTAVPD ATLIVDANES
WRAEGLAARC QLLADLGVAM LEQPLPAQDD AALENFIHPL PICADESCHT RSNLKALKGR
YEMVNIKLDK TGGLTEALAL ATEARAQGFS LMLGCMLCTS RAISAALPLV PQVSFADLDG
PTWLAVDVEP ALQFTTGELH L