Gene EcolC_2294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2294 
Symbol 
ID6066869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2530707 
End bp2531738 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content43% 
IMG OID641601698 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_001725257 
Protein GI170020303 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCTG AACTGTTTAC AAATAATGCG CTTAATCTGG TCATTATTTT CGGTAGCTGC 
GCAGCATTGA TTCTGATGAG CTTTTGGTTT CGCCGTGGAA ATCGTAAAAG AAAAGGATTT
TTATTCCATG CGGTGCAATT TTTAATCTAC ACCATAATTA TCAGTGCTGT TGGTAGCATT
ATTAATTATG TTATAGAAAA CTATAAACTC AAATTTATCA CCCCAGGCGT TATCGATTTT
ATCTGTACGT CCCTGATTGC GGTTATTCTG ACGATTAAGC TATTTCTGCT GATTAATCAG
TTTGAAAAAC AGCAGATTAA AAAAGGTCGC GATATCACCA GTGCGCGGAT TATGTCGCGT
ATCATCAAAA TCACCATTAT TGTGGTGCTT GTTCTGCTTT ATGGCGAACA TTTCGGCATG
AGCCTTTCTG GCTTGCTGAC CTTTGGTGGT ATTGGTGGTC TGGCTGTCGG TATGGCCGGT
AAAGATATTC TGAGTAACTT CTTTTCCGGG ATTATGCTCT ATTTCGACCG TCCTTTCAGT
ATTGGCGACT GGATCCGTTC ACCGGACAGA AATATCGAAG GTACAGTAGC GGAAATTGGC
TGGCGAATTA CCAAAATTAC GACCTTTGAT AATCGTCCAT TGTACGTACC GAACTCGCTG
TTTTCGTCGA TCAGCGTAGA AAACCCAGGA CGAATGACCA ACCGCCGCAT TACCACGACC
ATTGGTTTAC GTTATGAGGA TGCGGCAAAA GTGGGCGTTA TTGTCGAAGC TGTACGTGAG
ATGCTGAAAA ATCACCCGGC CATCGACCAG CGACAAACCT TACTGGTTTA TTTCAACCAG
TTTGCTGACT CTTCATTGAA TATTATGGTT TATTGCTTTA CCAAAACCAC GGTATGGGCT
GAATGGCTTG CTGCACAGCA AGACGTTTAT TTGAAGATTA TCGATATTGT ACAGTCACAC
GGCGCGGACT TTGCCTTCCC CAGCCAGACG CTGTATATGG ATAACATTAC ACCGCCGGAA
CAGGGTCGCT AA
 
Protein sequence
MIAELFTNNA LNLVIIFGSC AALILMSFWF RRGNRKRKGF LFHAVQFLIY TIIISAVGSI 
INYVIENYKL KFITPGVIDF ICTSLIAVIL TIKLFLLINQ FEKQQIKKGR DITSARIMSR
IIKITIIVVL VLLYGEHFGM SLSGLLTFGG IGGLAVGMAG KDILSNFFSG IMLYFDRPFS
IGDWIRSPDR NIEGTVAEIG WRITKITTFD NRPLYVPNSL FSSISVENPG RMTNRRITTT
IGLRYEDAAK VGVIVEAVRE MLKNHPAIDQ RQTLLVYFNQ FADSSLNIMV YCFTKTTVWA
EWLAAQQDVY LKIIDIVQSH GADFAFPSQT LYMDNITPPE QGR