| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2263 |
|---|
| Symbol | |
|---|
| ID | 6067034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 2493390 |
|---|
| End bp | 2494460 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641601667 |
|---|
| Product | phenylacetate-CoA oxygenase/reductase, PaaK subunit |
|---|
| Protein accession | YP_001725226 |
|---|
| Protein GI | 170020272 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | [TIGR02160] phenylacetate-CoA oxygenase/reductase, PaaK subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.379907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACGT TTCATTCCTT AACGGTGGCA AAAGTGGAGC CGGAAACCCG TGATGCGGTG
ACCATTACCT TTGCGGTGCC CCAGCCTTTG CAGGAGGCGT ATCGCTTTCG CCCCGGTCAA
CATTTGACCT TAAAAGCCAG CTTTGATGGT GAAGAATTAC GCCGTTGTTA CTCCATTTGC
CGCAGCTATC TGCCTGGCGA AATTAGTGTG GCGGTGAAAG CCATTGAAGG CGGACGTTTC
TCCCGCTATG CCCGCGAACA CATCCGCCAG GGTATGACGC TGGAGGTCAT GGTGCCGCAG
GGGCATTTCG GCTATCAGCC GCAGGCCGAA CGCCAGGGCC GCTATCTGGC AATTGCAGCA
GGATCAGGTA TTACGCCAAT GCTGGCGATT ATCGCCACCA CTTTACAAAC CGAGCCTGAA
AGTCAGTTCA CCCTGATCTA CGGTAACCGT ACCAGCCAGA GCATGATGTT TCGCCAGGCA
CTGGCAGACC TGAAAGACAA ATATCCTCAG CGTTTACAGT TGTTGTGCAT TTTCAGTCAG
GAAACCCTCG ACAGCGATCT GCTTCACGGG CGTATTGACG GTGAAAAATT ACAGTCACTT
GGGGCCTCGC TCATTAATTT TCGTCTTTAT GATGAGGCGT TTATTTGTGG TCCGGCGGCG
ATGATGGATG ACGCGGAAAC CGCCTTAAAA GCACTGGGAA TGCCAGAAAA AGCGATTCAT
CTGGAGCGGT TTAATACGCC TGGCACGCGC GTCAAACGTA GCGTTAACGT GCAAAGTGAC
GGACAAAAAG TGACTGTACG TCAGGATGGG CGGGATCGGG AAATCGTGCT TAATGCCGAC
GATGAAAGCA TTCTCGATGC GGCATTGCGC CAGGGGGCGG ATCTGCCCTA TGCCTGCAAA
GGCGGCGTCT GTGCGACCTG CAAATGCAAA GTGCTGCGTG GCAAAGTGGC GATGGAAACC
AATTACAGTC TGGAACCGGA TGAACTGGCC GCAGGCTATG TGTTGAGTTG CCAGGCACTG
CCGCTGACCA GCGATGTGGT GGTTGACTTT GACGCGAAGG GGATGGCATG A
|
|---|
| Protein sequence | MTTFHSLTVA KVEPETRDAV TITFAVPQPL QEAYRFRPGQ HLTLKASFDG EELRRCYSIC
RSYLPGEISV AVKAIEGGRF SRYAREHIRQ GMTLEVMVPQ GHFGYQPQAE RQGRYLAIAA
GSGITPMLAI IATTLQTEPE SQFTLIYGNR TSQSMMFRQA LADLKDKYPQ RLQLLCIFSQ
ETLDSDLLHG RIDGEKLQSL GASLINFRLY DEAFICGPAA MMDDAETALK ALGMPEKAIH
LERFNTPGTR VKRSVNVQSD GQKVTVRQDG RDREIVLNAD DESILDAALR QGADLPYACK
GGVCATCKCK VLRGKVAMET NYSLEPDELA AGYVLSCQAL PLTSDVVVDF DAKGMA
|
|---|
| |