Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2245 |
Symbol | |
ID | 6066961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 2464380 |
End bp | 2468282 |
Gene Length | 3903 bp |
Protein Length | 1300 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641601650 |
Product | ATP-dependent RNA helicase HrpA |
Protein accession | YP_001725209 |
Protein GI | 170020255 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.448406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAC AACAAAAATT GACCTTTACG GCCTTGCAGC AGCGGCTGGA TTCGCTGATG CTGCGTGACA GACTGCGTTT TTCTCGCCGT CTGCACGGCG TGAAGAAGGT TAAAAATCCT GATGCACAAC AGGCCATTTT CCAGGAGATG GCGAAAGAGA TTGACCAGGC GGCAGGGAAA GTCCTGCTGC GTGAAGCGGC ACGACCGGAA ATTACTTATC CTGACAATTT ACCGGTTAGT CAGAAAAAAC AGGACATTCT CGAAGCGATT CGTGATCACC AGGTGGTGAT CGTCGCCGGG GAAACGGGTT CTGGTAAAAC GACTCAGTTA CCGAAAATCT GTATGGAGCT GGGGCGCGGG ATTAAAGGAC TGATCGGCCA TACCCAGCCG CGTCGTCTGG CGGCAAGAAC AGTGGCGAAC CGTATTGCGG AAGAGCTGAA AACGGAGCCG GGCGGTTGCA TCGGTTACAA AGTGCGTTTC AGCGATCACG TAAGTGATAA CACGATGGTC AAGCTGATGA CCGACGGTAT CCTGCTGGCG GAGATCCAGC AAGACCGCCT GCTGATGCAG TACGACACTA TCATTATTGA CGAAGCGCAC GAACGCAGCC TGAATATCGA TTTTTTGCTC GGCTATTTGA AAGAGTTGCT GCCGCGGCGT CCTGACCTAA AAATCATTAT CACTTCCGCG ACTATCGACC CGGAACGCTT TTCGCGCCAC TTTAATAATG CGCCGATTAT TGAAGTCTCC GGTCGGACCT ATCCGGTGGA AGTGCGCTAT CGCCCGATTG TTGAAGAAGC CGATGACACC GAGCGCGATC AGTTGCAGGC GATTTTTGAC GCCGTAGACG AACTGAGTCA GGAAAGCCAT GGCGACATTC TGATCTTTAT GAGCGGCGAG CGGGAAATCC GCGATACCGC CGATGCGCTG AACAAGCTGA ACTTACGCCA TACCGAAATC TTGCCGCTTT ATGCGCGGCT TTCGAACAGC GAACAAAATA GGGTATTCCA GTCGCACAGC GGACGGCGCA TTGTGCTGGC GACCAACGTC GCGGAAACGT CGCTGACCGT ACCGGGGATT AAATACGTTA TCGACCCCGG TACAGCGCGT ATCAGCCGCT ACAGCTATCG CACCAAAGTG CAGCGTTTGC CGATTGAGCC GATTTCCCAG GCGTCTGCCA ATCAGCGTAA AGGCCGCTGT GGTCGTGTGT CCGAAGGGAT CTGTATTCGT CTCTATTCCG AAGACGATTT CCTCTCGCGC CCGGAGTTTA CCGATCCGGA GATTCTGCGT ACCAACCTGG CCTCGGTTAT TTTGCAGATG ACCGCGCTGG GGCTGGGCGA TATCGCTGCG TTCCCGTTTG TCGAAGCACC GGATAAACGC AATATCCAGG ATGGCGTGCG TCTGCTCGAA GAGCTGGGCG CGATCACCAC TGATGAACAG GCCAGCGCCT ATAAACTGAC GCCGCTCGGT CGCCAGCTCT CGCAGTTGCC TGTCGACCCA CGTCTGGCGC GTATGGTGCT GGAAGCGCAA AAACATGGCT GCGTGCGTGA GGCGATGATT ATCACGTCCG CGCTCTCCAT TCAGGATCCG CGCGAACGTC CGATGGACAA ACAGCAGGCA TCGGACGAAA AACATCGTCG CTTCCACGAC AAAGAGTCTG ACTTTCTCGC GTTTGTGAAT CTGTGGAATT ATCTTGGCGA GCAGCAAAAG GCGCTTTCTT CCAACGCCTT CCGTCGCCTG TGTCGTACCG ATTATCTCAA CTATCTGCGC GTGCGCGAAT GGCAGGATAT CTACACCCAG TTGCGTCAGG TGGTGAAAGA ACTTGGCATT CCGGTTAACA GCGAACCGGC GGAGTATCGC GAAATTCACA TTGCGTTGCT GACCGGTTTG CTTTCCCATA TCGGCATGAA AGATGCCGAT AAACAAGAAT ATACCGGCGC ACGTAACGCG CGTTTCTCCA TCTTCCCCGG TTCTGGTTTA TTCAAAAAAC CGCCTAAATG GGTAATGGTG GCGGAACTGG TAGAAACCAG CCGCCTGTGG GGGCGCATTG CTGCGCGTAT CGACCCGGAA TGGGTGGAGC CAGTTGCTCA GCATTTGATT AAACGCACCT ACAGCGAACC GCACTGGGAA CGGGCGCAGG GCGCGGTGAT GGCAACGGAA AAAGTCACTG TTTATGGTTT GCCGATTGTT GCTGCGCGTA AGGTCAACTA CAGCCAGATC GGTCCGGCGT TATGTCGTGA ACTCTTTATT CGCCACGCTC TGGTGGAAGG TGACTGGCAG ACGCGTCACG CATTCTTCCG TGAAAACCTG AAACTGCGGG CCGAAGTGGA AGAGCTGGAA CACAAATCAC GTCGCCGCGA TATTCTGGTT GATGACGAAA CGCTGTTTGA GTTCTACGAC CAGCGCATCA GCCACGATGT AATCTCCGCT CGTCACTTCG ATAGCTGGTG GAAAAAAGTC AGCCGCGAAA CGCCTGATTT GCTCAACTTT GAAAAGAGCA TGTTGATCAA AGAAGGGGCG GAAAAAATCA GCAAGCTGGA TTACCCGAAC TTCTGGCATC AGGGCAATCT CAAGCTGCGT TTGAGCTATC AGTTTGAGCC AGGCGCAGAC GCGGACGGTG TGACCGTACA TATTCCGCTG CCGTTACTTA ACCAGGTTGA GGAAAGCGGG TTTGAATGGC AGATCCCCGG TCTGCGCCGC GAATTGGTGA TTGCTCTGAT TAAATCGTTG CCGAAACCGG TACGCCGTAA TTTTGTGCCT GCACCAAACT ACGCCGAAGC GTTTTTAGGC CGCGTCACAC CGCTGGAGTT ACCGTTGCTC GACAGCCTTG AGCGCGAGTT ACGGCGGATG ACCGGCGTTA CCGTTGACCG CGAAGACTGG CACTGGGATC AGGTGCCCGA TCACCTGAAA ATCACCTTCC GCGTGGTGGA TGACAAAAAC AAGAAGCTAA AAGAAGGGCG CTCGCTACAA GATCTGAAAG ATGCGCTGAA AGGCAAAGTG CAGGAAACGC TGTCTGCGGT GGCGGATGAC GGTATCGAGC AGAGCGGGCT GCATATCTGG AGTTTTGGTC AGCTGCCGGA AAGCTACGAA CAGAAGCGTG GCAACTACAA AGTGAAGGCG TGGCCAGCGC TAGTGGATGA ACGCGACAGT GTGGCGATCA AACTGTTTGA TAATCCGCTA GAGCAAAAAC AGGCAATGTG GAACGGTCTT CGCCGTCTAC TGCTGCTGAA TATTCCCTCG CCGATCAAGT ATTTACATGA GAAGTTACCA AACAAAGCCA AGCTGGGGCT GTACTTTAAC CCGTATGGCA AAGTGCTGGA GCTGATCGAC GACTGTATCT CCTGCGGTGT GGATAAATTG ATCGACGCCA ATGGTGGCCC GGTCTGGACG GAAGAAGGCT TTGCTGCGCT GCATGAAAAA GTGCGTGCCG AACTGAACGA CACGGTGGTG GATATTGCGA AGCAGGTCGA GCAAATCCTT ACGGCAGTGT TCAATATCAA CAAACGTCTG AAAGGGCGGG TGGATATGAC CATGGCGCTG GGGCTTTCTG ACATTAAAGC GCAGATGGGC GGGTTGGTAT ATCGCGGTTT TGTCACTGGT AACGGCTTCA AACGGCTGGG CGACACGCTG CGATATTTGC AGGCGATTGA AAAACGACTG GAAAAACTGG CGGTTGATCC ACATCGCGAC CGTGCTCAGA TGCTGAAAGT CGAAAACGTC CAGCAGGCGT GGCAGCAATG GATCAACAAA CTGCCGCCTG CACGTCGTGA GGATGAAGAC GTGAAAGAGA TCCGTTGGAT GATAGAAGAG CTGCGCGTTA GTTACTTCGC TCAACAACTT GGTACGCCTT ATCCGATTTC AGATAAGCGT ATTTTGCAGG CGATGGAGCA GATTAGCGGT TAA
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Protein sequence | MTEQQKLTFT ALQQRLDSLM LRDRLRFSRR LHGVKKVKNP DAQQAIFQEM AKEIDQAAGK VLLREAARPE ITYPDNLPVS QKKQDILEAI RDHQVVIVAG ETGSGKTTQL PKICMELGRG IKGLIGHTQP RRLAARTVAN RIAEELKTEP GGCIGYKVRF SDHVSDNTMV KLMTDGILLA EIQQDRLLMQ YDTIIIDEAH ERSLNIDFLL GYLKELLPRR PDLKIIITSA TIDPERFSRH FNNAPIIEVS GRTYPVEVRY RPIVEEADDT ERDQLQAIFD AVDELSQESH GDILIFMSGE REIRDTADAL NKLNLRHTEI LPLYARLSNS EQNRVFQSHS GRRIVLATNV AETSLTVPGI KYVIDPGTAR ISRYSYRTKV QRLPIEPISQ ASANQRKGRC GRVSEGICIR LYSEDDFLSR PEFTDPEILR TNLASVILQM TALGLGDIAA FPFVEAPDKR NIQDGVRLLE ELGAITTDEQ ASAYKLTPLG RQLSQLPVDP RLARMVLEAQ KHGCVREAMI ITSALSIQDP RERPMDKQQA SDEKHRRFHD KESDFLAFVN LWNYLGEQQK ALSSNAFRRL CRTDYLNYLR VREWQDIYTQ LRQVVKELGI PVNSEPAEYR EIHIALLTGL LSHIGMKDAD KQEYTGARNA RFSIFPGSGL FKKPPKWVMV AELVETSRLW GRIAARIDPE WVEPVAQHLI KRTYSEPHWE RAQGAVMATE KVTVYGLPIV AARKVNYSQI GPALCRELFI RHALVEGDWQ TRHAFFRENL KLRAEVEELE HKSRRRDILV DDETLFEFYD QRISHDVISA RHFDSWWKKV SRETPDLLNF EKSMLIKEGA EKISKLDYPN FWHQGNLKLR LSYQFEPGAD ADGVTVHIPL PLLNQVEESG FEWQIPGLRR ELVIALIKSL PKPVRRNFVP APNYAEAFLG RVTPLELPLL DSLERELRRM TGVTVDREDW HWDQVPDHLK ITFRVVDDKN KKLKEGRSLQ DLKDALKGKV QETLSAVADD GIEQSGLHIW SFGQLPESYE QKRGNYKVKA WPALVDERDS VAIKLFDNPL EQKQAMWNGL RRLLLLNIPS PIKYLHEKLP NKAKLGLYFN PYGKVLELID DCISCGVDKL IDANGGPVWT EEGFAALHEK VRAELNDTVV DIAKQVEQIL TAVFNINKRL KGRVDMTMAL GLSDIKAQMG GLVYRGFVTG NGFKRLGDTL RYLQAIEKRL EKLAVDPHRD RAQMLKVENV QQAWQQWINK LPPARREDED VKEIRWMIEE LRVSYFAQQL GTPYPISDKR ILQAMEQISG
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