| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2224 |
|---|
| Symbol | |
|---|
| ID | 6064980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 2442599 |
|---|
| End bp | 2444602 |
|---|
| Gene Length | 2004 bp |
|---|
| Protein Length | 667 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641601630 |
|---|
| Product | peptidase U32 |
|---|
| Protein accession | YP_001725189 |
|---|
| Protein GI | 170020235 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.787396 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTAAAA TAGCCGCCAT TTTTCAGCTA CTGGATAAGA ATGTGACCGT ATCTTCTCAT
CGACTTGAAC TGTTAAGCCC GGCACGCGAT GCCGCCATTG CCCGCGAAGC TATTTTGCAC
GGTGCCGATG CTGTTTATAT CGGCGGCCCT GGTTTTGGTG CCCGTCATAA TGCCAGTAAT
AGCTTGAAAG ATATTGCCGA GCTGGTGCCG TTTGCCCATC GTTATGGTGC AAAAATTTTC
GTCACGCTTA ACACCATTTT GCATGATGAT GAGCTGGAAC CCGCGCAACG GCTGATTACT
GACCTCTACC AGACCGGTGT CGATGCGCTG ATTGTTCAGG ATATGGGGAT TCTGGAACTT
GATATTCCGC CGATTGAACT GCACGCCAGT ACGCAGTGCG ACATTCGTAC AGTTGAAAAA
GCGAAGTTCC TCTCTGATGT TGGCTTCACG CAGATTGTGC TGGCGCGAGA GCTGAATCTT
GATCAGATCC GCGCGATTCA CCAGGCTACG GACGCGACCA TTGAATTCTT TATTCATGGG
GCACTGTGCG TGGCCTATTC GGGTCAGTGC TACATTTCTC ATGCGCAAAC AGGGCGTAGC
GCCAACCGTG GCGATTGCTC GCAGGCGTGC CGTTTGCCAT ACACATTGAA AGACGATCAG
GGGCGGGTGG TTTCCTATGA AAAACATCTG CTGTCGATGA AAGATAACGA TCAGACTGCC
AACCTCGGCG CGCTGATTGA TGCTGGTGTA CGCTCCTTCA AGATTGAAGG GCGTTACAAA
GATATGAGCT ACGTGAAGAA TATCACCGCC CATTATCGCC AGATGCTTGA TGCCATTATT
GAAGAACGTG GCGATCTGGC GCGCGCTTCA TCAGGTCGTA CTGAACATTT CTTTGTTCCA
TCGACGGAAA AGACTTTCCA CCGTGGTAGC ACAGATTATT TTGTGAATGC CCGTAAAGGC
GATATTGGCG CGTTCGATTC GCCGAAATTT ATCGGCCTGC CGGTAGGCGA AGTATTGAAA
GTGGCGAAAG ATCATCTCGA TGTTGCCGTT ACCGAGCCAC TGGCAAATGG CGATGGCCTG
AACGTGTTGA TTAAACGTGA AGTCGTCGGT TTTCGTGCCA ATACGGTCGA GAAAACCGGA
GAAAATCAGT ACCGCGTCTG GCCCAATGAA ATGCCAGCAG ATTTGCACAA AATTCGTCCA
CATCACCCAC TAAACCGTAA TCTTGATCAT AACTGGCAGC AGGCACTGAC AAAAACCTCC
AGCGAACGTC GGGTGGCGGT AGACATTGAA CTGGGCGGCT GGCAGGAACA ACTGATTCTG
ACCCTCACCA GTGAAGAGGG TGTCAGCATC ACGCATACGC TGGACGGGCA GTTCGACGAA
GCCAATAACG CCGAAAAAGC AATGAACAAT CTGAAGGATG GTCTGGCAAA ACTGGGGCAA
ACCCTCTATT ACGCCCGCGA TGTGCAAATT AATTTGCCGG GGGCGCTGTT TGTACCAAAC
AGTCTGTTAA ACCAGTTCCG CCGTGAAGCT GCTGACATGC TGGATGCTGC GCGTCTTGCC
AGTTACCAGC GCGGCAGCCG TAAACCGGTT GCTGATCCTG CGCCGGTTTA TCCGCAAACG
CATCTGAGTT TCCTCGCGAA CGTATACAAC CAGAAAGCGC GTGAATTTTA TCATCGCTAT
GGTGTGCAGC TGATTGACGC GGCGTATGAA GCACATGAAG AGAAGGGCGA AGTCCCGGTG
ATGATCACCA AGCATTGTCT GCGCTTTGCC TTTAATCTGT GCCCGAAACA GGCGAAAGGC
AATATCAAAA GCTGGAAGGC GACGCCAATG CAACTGGTTA ACGGCGATGA AGTATTAACG
CTAAAGTTTG ATTGCCGCCC ATGCGAGATG CACGTCATTG GCAAAATCAA AAATCACATA
CTGAAAATGC CGTTACCGGG AAGCGTAGTG GCATCCGTAA GTCCGGATGA GCTGCTGAAA
ACATTGCCTA AGCGAAAAGG GTAA
|
|---|
| Protein sequence | MAKIAAIFQL LDKNVTVSSH RLELLSPARD AAIAREAILH GADAVYIGGP GFGARHNASN
SLKDIAELVP FAHRYGAKIF VTLNTILHDD ELEPAQRLIT DLYQTGVDAL IVQDMGILEL
DIPPIELHAS TQCDIRTVEK AKFLSDVGFT QIVLARELNL DQIRAIHQAT DATIEFFIHG
ALCVAYSGQC YISHAQTGRS ANRGDCSQAC RLPYTLKDDQ GRVVSYEKHL LSMKDNDQTA
NLGALIDAGV RSFKIEGRYK DMSYVKNITA HYRQMLDAII EERGDLARAS SGRTEHFFVP
STEKTFHRGS TDYFVNARKG DIGAFDSPKF IGLPVGEVLK VAKDHLDVAV TEPLANGDGL
NVLIKREVVG FRANTVEKTG ENQYRVWPNE MPADLHKIRP HHPLNRNLDH NWQQALTKTS
SERRVAVDIE LGGWQEQLIL TLTSEEGVSI THTLDGQFDE ANNAEKAMNN LKDGLAKLGQ
TLYYARDVQI NLPGALFVPN SLLNQFRREA ADMLDAARLA SYQRGSRKPV ADPAPVYPQT
HLSFLANVYN QKAREFYHRY GVQLIDAAYE AHEEKGEVPV MITKHCLRFA FNLCPKQAKG
NIKSWKATPM QLVNGDEVLT LKFDCRPCEM HVIGKIKNHI LKMPLPGSVV ASVSPDELLK
TLPKRKG
|
|---|
| |