Gene EcolC_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2216 
Symbol 
ID6066400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2435785 
End bp2436579 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content54% 
IMG OID641601622 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001725181 
Protein GI170020227 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTCTG AACGCGCACC GTTTTTCCTC AAACTGGCGG CCTGGGGCGG CGTTGTTTTC 
CTACATTTTC CCATCCTGAT AATCGCCGCC TATGCGTTTA ACACTGAAGA TGCGGCGTTT
AGTTTTCCAC CGCAGGGCCT GACGCTGCGC TGGTTTAGCG TGGCAGCACA GCGTAGTGAT
ATTCTTGATG CCGTGACACT GTCACTTAAA GTGGCGGCGC TGGCGACATT AATTGCGCTG
GTGTTAGGGA CGCTGGCAGC TGCCGCGCTG TGGCGACGAG ACTTTTTCGG CAAAAACGCC
ATTTGGCTGT TACTGCTGCT GCCCATTGCG CTGCCGGGCA TTGTCACTGG TCTGGCGTTA
TTAACCGCCT TTAAAACCAT CAATCTGGAG CCGGGATTTT TCACCATCGT GGTCGGTCAT
GCGACTTTTT GTGTAGTTGT GGTGTTTAAC AATGTCATCG CCCGTTTTCG CCGCACCTCC
TGGAGTCTGG TTGAGGCGTC AATGGATCTT GGGGCCAATG GCTGGCAAAC CTTCCGCTAC
GTAGTGTTGC CGAATCTCAG TTCGGCGTTA CTGGCAGGAG GAATGCTGGC GTTTGCCTTG
TCGTTCGATG AAATCATCGT TACGACCTTT ACGGCAGGTC ATGAACGAAC GTTACCGTTG
TGGTTGCTCA ATCAGCTTGG GCGACCGCGT GATGTACCGG TAACTAACGT GGTGGCACTG
CTGGTTATGT TGGTAACAAC CTTGCCGATC CTGGGGGCCT GGTGGCTAAC CCGCGAAGGC
GACAATGGTC AATAA
 
Protein sequence
MHSERAPFFL KLAAWGGVVF LHFPILIIAA YAFNTEDAAF SFPPQGLTLR WFSVAAQRSD 
ILDAVTLSLK VAALATLIAL VLGTLAAAAL WRRDFFGKNA IWLLLLLPIA LPGIVTGLAL
LTAFKTINLE PGFFTIVVGH ATFCVVVVFN NVIARFRRTS WSLVEASMDL GANGWQTFRY
VVLPNLSSAL LAGGMLAFAL SFDEIIVTTF TAGHERTLPL WLLNQLGRPR DVPVTNVVAL
LVMLVTTLPI LGAWWLTREG DNGQ