Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2208 |
Symbol | |
ID | 6067101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 2428276 |
End bp | 2430378 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641601614 |
Product | TonB-dependent receptor |
Protein accession | YP_001725173 |
Protein GI | 170020219 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.346262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTT TTTCCGTCCG ACAGACCGTT TTGCCCGCAC TACTTGCCCT TTCCCCCGTT GTTTTTGCCG CTGATGAACA GACCATGATT GTCAGTGCCG CACCGCAGGT GGTTTCAGAA CTGGATACCC CAGCAGCAGT AAGCGTGGTG GATGGCGAGG AGATGCGCCT GGCAACACCG CGCATTAACT TGTCCGAATC ACTGACCAGC GTGCCTGGTT TGCAGGTACA AAATCGGCAG AACTATGCGC AAGATTTACA GCTGTCGATT CGCGGATTTG GCTCCCGCTC CACTTACGGA ATTCGCGGTA TTCGCCTGTA TGTGGACGGT ATTCCCGCTA CCATGCCCGA CGGGCAAGGG CAAACATCCA ACATCGATTT AAGCAGTGTG CAAAATGTGG AAGTGCTGCG TGGCCCCTTC TCTGCCCTGT ATGGCAACGC GTCTGGCGGT GTAATGAATG TCACCACCCA GACCGGGCAA CAGCCACCAA CCATTGAAGC CAGCAGTTAC TACGGCAGTT TTGGCAGCTG GCGCTATGGG CTCAAAGCAA CGGGTGCAAC GGGCGACGGC ACACAGCCCG GCGATGTCGA TTACACCGTC TCAACCACGC GTTTTACGAC CCACGGCTAT CGTGACCATA GTGGCGCACA GAAAAATTTA GCTAATGCCA AACTGGGCGT ACGCATTGAT GACGCCAGCA AATTAAGCCT GATTTTCAAT AGCGTGGATA TCAAAGCAGA TGACCCTGGT GGGCTAACCA AAGCAGAATG GAAAGCGAAT CCGCAACAAG CGCCACGCGC TGAACAATAC GACACGCGAA AAACCATCAA GCAAACTCAG GCTGGGTTGC GCTATGAACG TAGCCTGAGT TCGCGGGATG ATATGAGTGT GATGATGTAT GCCGGAGAGC GAGAAACGAC CCAGTACCAG TCAATACCCA TGGCACCACA ACTTAACCCG TCACATGCGG GCGGCGTGAT TACCCTGCAA CGCCATTACC AGGGAATAGA CAGCCGCTGG ACACACCGTG GTGAACTGGG CGTTCCGGTC ACGTTCACTA CCGGCCTGAA CTACGAAAAC ATGAGTGAAA ACCGCAAGGG CTACAATAAC TTCCGCCTGA ATAGCGGCAT GCCGGAGTAC GGGCAAAAAG GTGAGTTGCG TCGCGACGAA CGCAATCTGA TGTGGAACAT CGATCCCTAT TTACAGACGC AGTGGCAGCT GAGCGAAAAA CTGTCGCTGG ATGCTGGCGT GCGCTACAGC TCCGTGTGGT TTGATTCCAA CGACCATTAC ATTACTCCGG GTAACGGCGA TGACAGCGGT GATGCCAGTT ATCACAAATG GCTACCAGCC GGATCGTTAA AATATGCAAT GACCGATGCC TGGAATATCT ATCTGGCAGC CGGGCGTGGT TTTGAAACGC CGACGATTAA TGAGCTGTCT TATCGGGCTG ATGGGCAAAG CGGTATGAAC TTTGGTTTAA AACCATCCAC CAACGATACA ATTGAGATCG GCAGTAAAAC GCGTATTGGT GATGGGCTGC TTAGTCTCGC ATTGTTCCAG ACCGACACCG ATGATGAAAT TGTTGTCGAT AGCAGTAGCG GTGGGCGTAC GACTTACAAA AATGCTGGAA AGACCCGTCG TCAAGGCGCT GAACTGGCAT GGGATCAACG TTTCGCGGGA GATTTTCGCG TAAACGCGTC CTGGACCTGG CTTGATGCGA CCTATCGCAG CAATGTTTGC AATGAACAGG ATTGTAACGG TAATCGGATG CCTGGGATCG CCCGTAATAT GGGCTTTGCG TCGATAGGTT ATGTACCGGA AGATGGCTGG TATGCAGGCA CGGAAGCGCG TTATATGGGC GATATTATGG CAGATGATGA AAATACGGCC AAGGCGCCGT CTTATACTCT CATCGGCTTA TTCACCGGGT ATAAATACAA TTACCACAAT TTAACTGTGG ATTTATTTGG TCGTGTCGAT AATTTATTCG ATAAAGAATA CGTTGGTTCT GTCATTGTCA ATGAGTCAAA CGGGCGATAT TACGAACCTG CGCCCGGGCG AAATTATGGT GTCGGCGTGA ATATCGCATG GCGATTTGAG TAA
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Protein sequence | MKIFSVRQTV LPALLALSPV VFAADEQTMI VSAAPQVVSE LDTPAAVSVV DGEEMRLATP RINLSESLTS VPGLQVQNRQ NYAQDLQLSI RGFGSRSTYG IRGIRLYVDG IPATMPDGQG QTSNIDLSSV QNVEVLRGPF SALYGNASGG VMNVTTQTGQ QPPTIEASSY YGSFGSWRYG LKATGATGDG TQPGDVDYTV STTRFTTHGY RDHSGAQKNL ANAKLGVRID DASKLSLIFN SVDIKADDPG GLTKAEWKAN PQQAPRAEQY DTRKTIKQTQ AGLRYERSLS SRDDMSVMMY AGERETTQYQ SIPMAPQLNP SHAGGVITLQ RHYQGIDSRW THRGELGVPV TFTTGLNYEN MSENRKGYNN FRLNSGMPEY GQKGELRRDE RNLMWNIDPY LQTQWQLSEK LSLDAGVRYS SVWFDSNDHY ITPGNGDDSG DASYHKWLPA GSLKYAMTDA WNIYLAAGRG FETPTINELS YRADGQSGMN FGLKPSTNDT IEIGSKTRIG DGLLSLALFQ TDTDDEIVVD SSSGGRTTYK NAGKTRRQGA ELAWDQRFAG DFRVNASWTW LDATYRSNVC NEQDCNGNRM PGIARNMGFA SIGYVPEDGW YAGTEARYMG DIMADDENTA KAPSYTLIGL FTGYKYNYHN LTVDLFGRVD NLFDKEYVGS VIVNESNGRY YEPAPGRNYG VGVNIAWRFE
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