| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2202 |
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| Symbol | |
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| ID | 6064823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 2419976 |
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| End bp | 2422084 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641601608 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001725167 |
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| Protein GI | 170020213 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0264417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACCG GATTACGTTT CACACTTGAA GTGGACGGCC TGCCACCGGA CGCGTTTGCG
GTGGTTTCCT TTCATCTCAC CCAGTCACTC TCTTCACTTT TTTCCCTCGA CCTTTCTCTG
GTCAGTCAGC AGTTTCTTTC CCTTGAATTT GCGCAGGTGC TGGACAAAAT GGCCTACCTG
ACGGTATGGC AGGGCGATGA CGTACAGCGC CGGGTGAAAG GCGTGGTGAC CTGGTTTGAA
CTCGGGGAGA ACGACAAAAA CCAGATGCTG TACAGCATGA AGGTGCACCC GCCGCTGTGG
CGTGCCGGTC TGCGCCAGAA CTTCCGTATC TTCCAGAACG AGGACATCAA AAGCATCCTC
GGCACGATGT TGCAGGAAAA CGGGGTGACC GAATGGAGTC CGCTGTTCAG CGAGCCGCAT
CCTTCCCGTG AGTTTTGTGT CCAGTACGGT GAGACTGATT ACGATTTCCT GTGCCGGATG
GCGGCGGAGG AAGGCATCTT CTTTTATGAG GAGCATGCTT ACAAAAGTAC CGACCAGAGC
CTGGTGCTGT GCGACACAGT CCGCCATCTG CCCGAATCTT TTGAAATCCC ATGGAACCCG
AACACCCGTA CCGAGGTGAG CACCCTCTGC ATCAGCCAGT TCCGCTACAG CGCACAAATC
CGCCCTTCTT CCGTGGTGAC CAAAGACTAC ACCTTTAAAC GCCCCGGCTG GGCCGGACGT
TTTGAACAGG AAGGCCAGCA CCAGGACTAC CAGCGCACGC AGTATGAAGT GTATGACTAC
CCCGGACGTT TCAAGGGTGC CCACGGGCAG AACTTTGCCC GCTGGCAGAT GGACGGCTGG
CGAAACAATG CAGAAACCGC GCGGGGAATG AGTCGCTCGC CGGAGATATG GCCGGGACGA
CGAATTGTGC TGACGGGGCA TCCGCAGGCG AACCTGAACC GGGAATGGCA GGTGGTGGCA
AGTGAACTGC ACGGCGAACA GCCACAGGCG GTGCCAGGAC GGCAGGGAGC GGGGACGGCG
CTGGAGAACC ATTTTGCGGT GATCCCGGCA GACAGAACAT GGCGACCACA GCCGTTGCTG
AAACCGCTGG TCGACGGCCC GCAGAGCGCT GTCGTGACAG GACCGGCAGG CGAGGAAATC
TTCTGCGACG AACATGGTCG CGTGCGGGTG AAGTTCAACT GGGACCGTTA TAACCCGGCA
GACCAAGACA GTTCATGCTG GATCCGTGTG GCACAGGCGT GGGCAGGCAC CGGCTTTGGC
AACCTGGCGA TACCGCGAGT GGGTCAGGAG GTGATTGTGG ACTTCCTCAA CGGCGACCCG
GACCAGCCGA TTATTATGGG GCGTACCTAC CACCATGAAA ACCGCACACC CGGCAGCCTG
CCGGGGACGA AGACGCAGAT GACGATCCGC TCGAAAACCT ATAAGGGCAG CGGGTTTAAT
GAACTGAAGT TTGACGATGC GACAGGGAAA GAACAGGTCT ACATCCACGC GCAGAAGAAC
ATGAACACCG AGGTGCTGAA TAACCGCACC ACTGATGTGA TAAACAACCA TGCTGAAACC
ATTGGCAACA ATCAGATGAT TGCGGTTACC AACAATCAGA TACAGACGGT GGGTGTTAAC
CAGATAGAGA CGGTGGGCAG TAACCAGATA ATTAAAGTGG GTTCTGTTCA GGTGGAAACG
ATTGGACTTG TTCGTGCGCT GACCGTGGGC GTGGCGTACC AGACGACGGT AGGTGGCATT
ATGAACACTT CGGTGGCTCT GATGCAGTCC TCGCAGATCG GTTTGCATAA ATCGTTGAGG
GTCGGGCTGG GTTATGACGT CAAAGTCGGA AATAACGTTA CCTTCACCGT TGGTAAAACG
AAAAAGGATG ATACCGGGCA GACCGCGATT TACTCCGCCG GTGAGCATCT GGAGCTCTGC
TGTGGTAAGG CAAGGCTGGT GCTGACGAAG GACGGACAAA TTTTTCTCAA CGGCACAAAA
ATTCATTTGC AGGGTAAGGA GCAGGTTAAT GGTGACTCAC TGTTGATTAA CTGGAACTGT
GCAGCCTCGA AATCCCCACC GAAGACCCCT GATGAAAAGC AGGATACGCC GGATATGAGA
GAGTACTGA
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| Protein sequence | MSTGLRFTLE VDGLPPDAFA VVSFHLTQSL SSLFSLDLSL VSQQFLSLEF AQVLDKMAYL
TVWQGDDVQR RVKGVVTWFE LGENDKNQML YSMKVHPPLW RAGLRQNFRI FQNEDIKSIL
GTMLQENGVT EWSPLFSEPH PSREFCVQYG ETDYDFLCRM AAEEGIFFYE EHAYKSTDQS
LVLCDTVRHL PESFEIPWNP NTRTEVSTLC ISQFRYSAQI RPSSVVTKDY TFKRPGWAGR
FEQEGQHQDY QRTQYEVYDY PGRFKGAHGQ NFARWQMDGW RNNAETARGM SRSPEIWPGR
RIVLTGHPQA NLNREWQVVA SELHGEQPQA VPGRQGAGTA LENHFAVIPA DRTWRPQPLL
KPLVDGPQSA VVTGPAGEEI FCDEHGRVRV KFNWDRYNPA DQDSSCWIRV AQAWAGTGFG
NLAIPRVGQE VIVDFLNGDP DQPIIMGRTY HHENRTPGSL PGTKTQMTIR SKTYKGSGFN
ELKFDDATGK EQVYIHAQKN MNTEVLNNRT TDVINNHAET IGNNQMIAVT NNQIQTVGVN
QIETVGSNQI IKVGSVQVET IGLVRALTVG VAYQTTVGGI MNTSVALMQS SQIGLHKSLR
VGLGYDVKVG NNVTFTVGKT KKDDTGQTAI YSAGEHLELC CGKARLVLTK DGQIFLNGTK
IHLQGKEQVN GDSLLINWNC AASKSPPKTP DEKQDTPDMR EY
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