Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2186 |
Symbol | |
ID | 6066536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 2398017 |
End bp | 2399312 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641601593 |
Product | hypothetical protein |
Protein accession | YP_001725152 |
Protein GI | 170020198 |
COG category | [S] Function unknown |
COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.311872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAA TCACTTTAAA CGACAACCAT ATTGCACATT TAAACGCCAA AAACACTACA AAACTGGAAT ATTTAAACTT AAGCAATAAC AATTTACTGC CAACCAATGA CATTGATCAA CTAATATCAT CAAAACATCT TTGGCATGTA TTAGTTAACG GCATCAACAA TGATCCACTT GCACAAATGC AGTACTGGAC TGCAGTAAGA AATATAATTG ATGACACTAA TGAAGTGACC ATTGATTTAT CAGGACTTAA TTTAACCACT CAACCACCAG GGCTGCAAAA CTTCACCTCT ATCAATCTTG ATAATAACCA ACTCACACAT TTTGATGCAA CCAACTACGA TAGACTCGTA AAGCTAAGTC TGAATAGTAA TACTCTTGAG TCAATAAATT TTCCTCAAGG CAGAAATGTA AGTATTACAC ATATATCTAT GAATAATAAT GCTCTCAGAA ATATTGATAT AGATAGGCTT TCATCAGTTA CTTATTTTAG TGCGGCACAT AATCAACTAG AGTTTGTGCA ATTAGAATCT TGCGAATGGC TGCAATACCT GAATCTCAGC CATAATCAAT TAACTGATAT TGTTGCAGGT AATAAAAATG AACTCTTACT GCTGGATCTA TCCCATAATA AACTAACAAG TTTACACAAT GACTTATTTC CCAACTTGAA TACGTTACTT ATTAACAACA ATTTGCTTTC TGAAATTAAA ATATTCTATA GCAACTTCTG CAATGTTCAG ACATTAAACG CTGCTAACAA CCAGTTGAAA TATATAAATC TTGATTTCCT GACTTATCTT CCATCTATCA AAAGTTTAAG ACTGGACAAT AATAAAATAA CCCACATTGA TACTAATAAT ACATCCGATA TTGGAACTTT ATTCCCCATA ATAAAACAGA GCAAAAACTT AAATTTTTTA AATGTTTCTG GGAAGAACAA TTGCCCTACT ATGCAGCTCA TGTTATTTAA TTTATTTTCC CCAGCACTTA AGCTTAATAC TGGCCTGGCA ATTCTTTCGC CTGGTGCATT TGAAGTTCAC TCTGACGGAA TAGATGTGGA TAACGAATTG TTTCACTATC CTATTAAAAA AGCATATACC CCATATAATA TACACACTTA CAAGACAGAG GAAGTTGTAA ACCAGAGGAA TATAAAAGTT AAAAACATGA CCTTAGATGA AATAAACAAT ACTTACTGTA ATAACGATTA TTACAATCAG GCAATAAGAG AGGAACCGAT AGACCTTCTG GACAGATCGT TTTCCTCCAG TTCATGGCCT TTTTAG
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Protein sequence | MKTITLNDNH IAHLNAKNTT KLEYLNLSNN NLLPTNDIDQ LISSKHLWHV LVNGINNDPL AQMQYWTAVR NIIDDTNEVT IDLSGLNLTT QPPGLQNFTS INLDNNQLTH FDATNYDRLV KLSLNSNTLE SINFPQGRNV SITHISMNNN ALRNIDIDRL SSVTYFSAAH NQLEFVQLES CEWLQYLNLS HNQLTDIVAG NKNELLLLDL SHNKLTSLHN DLFPNLNTLL INNNLLSEIK IFYSNFCNVQ TLNAANNQLK YINLDFLTYL PSIKSLRLDN NKITHIDTNN TSDIGTLFPI IKQSKNLNFL NVSGKNNCPT MQLMLFNLFS PALKLNTGLA ILSPGAFEVH SDGIDVDNEL FHYPIKKAYT PYNIHTYKTE EVVNQRNIKV KNMTLDEINN TYCNNDYYNQ AIREEPIDLL DRSFSSSSWP F
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