Gene EcolC_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2173 
Symbol 
ID6066381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2384857 
End bp2385843 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content54% 
IMG OID641601580 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001725139 
Protein GI170020185 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAC CCGTTCTGGA CATTCAACAG CTGCATTTGA GTTTCCCCGG TTTTAACGGT 
GATGTTCACG CGCTCAACAA TGTGTCCTTG CAGATTAACC GCAGTGAAAT TGTCGGTCTG
GTGGGAGAAT CCGGCTCAGG TAAATCAGTC ACCGCAATGC TGATTATGCG TCTGCTACCG
ACGGGCAGTT ATTGCGTACA TCGGGGGCAG ATTTCACTGC TGGGAGACGA TGTTCTTAAC
GCTCGGGAAA AACAGCTTCG TCAGTGGCGC GGCGCACGAG TGGCGATGAT CTTTCAGGAA
CCGATGACCG CCCTCAATCC GACACGTCGA ATAGGTCTTC AGATGATGGA CGTGATCCGC
CATCATCAAC CAATAAGTCG TCGGGAAGCC AGAGCTAAAG CGATTGCCCT GCTGGAAGAG
ATGCAAATCC CGGATGCCGT GGAAGTTATG TCGCGCTATC CGTTTGAGCT TTCAGGTGGT
ATGCGCCAGC GGGTAATGAT TGCGCTGGCA TTCTCCTGCG AGCCGCAATT GATTATTGCC
GACGAACCGA CTACGGCGCT GGACGTCACG GTGCAGTTGC AGGTACTGCG TTTGCTTAAA
CATAAAGCCC GCGCCAGTGG AACTGCGGTT CTGTTCATCA GCCATGATAT GGCCGTGGTG
TCGCAACTGT GCGATAGCGT TTACGTGATG TATGCCGGAA GCGTAATTGA AAGCGGCGTG
AAGGCAGACG TTATCCATCA TCCCCGGCAT CCGTATACCA TTGGTTTGCT GCAATGCGCA
CCAGAACATG GAGTACCACG CCAGCTATTA CCCGCCATTC CAGGGACGGT ACCAAACCTC
ACCCATTTGC CTGACGGCTG CGCTTTTCGC GATCGTTGCT ATGCGGCAGG TGCACAGTGT
GAAAACGTCC CGGCGCTGAC AGCGTGTGGT GACAACAACC AGCGCTGCGC CTGTTGGTAT
CCGCAGCAGG AGGTCATAAG TGTCTGA
 
Protein sequence
MTQPVLDIQQ LHLSFPGFNG DVHALNNVSL QINRSEIVGL VGESGSGKSV TAMLIMRLLP 
TGSYCVHRGQ ISLLGDDVLN AREKQLRQWR GARVAMIFQE PMTALNPTRR IGLQMMDVIR
HHQPISRREA RAKAIALLEE MQIPDAVEVM SRYPFELSGG MRQRVMIALA FSCEPQLIIA
DEPTTALDVT VQLQVLRLLK HKARASGTAV LFISHDMAVV SQLCDSVYVM YAGSVIESGV
KADVIHHPRH PYTIGLLQCA PEHGVPRQLL PAIPGTVPNL THLPDGCAFR DRCYAAGAQC
ENVPALTACG DNNQRCACWY PQQEVISV