Gene EcolC_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2163 
Symbol 
ID6066999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2368676 
End bp2371459 
Gene Length2784 bp 
Protein Length927 aa 
Translation table11 
GC content47% 
IMG OID641601570 
Productpeptidase M16 domain-containing protein 
Protein accessionYP_001725129 
Protein GI170020175 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.618629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAACC TCTGTTTCTT ACTGACGTTA GTGGCAACTC TGTTGCTCCC CGGGCGACTG 
ATTGCCGCCG CCTTACCGCA GGATGAAAAG TTAATTACCG GGCAACTGGA CAATGGCTTG
CGATATATGA TTTATCCGCA TGCTCATCCA AAGGATCAGG TAAATTTATG GCTGCAAATT
CATACCGGTT CATTGCAGGA AGAAGACAAT GAGCGCGGCG TGGCTCATTT TGTAGAACAT
ATGATGTTTA ACGGCACAAA AACATGGCCG GGTAATAAAG TCATCGAAAC ATTTGAGTCA
ATGGGCCTGC GTTTTGGTCG CGATGTTAAT GCCTATACCA GCTATGACGA AACGGTGTAT
CAGGTGAGTT TGCCGACTAC GCAGAAACAA AATCTGCAAC AAGTGATGGC AATCTTCAGT
GAATGGAGTA ATGCCGCAAC CTTTGAAAAA CTCGAAGTAG ACGCTGAACG TGGCGTAATT
ACTGAGGAAT GGCGTGCCCA TCAGGATGCG AAATGGCGCA CCTCTCAGGC GCGCCGCCCT
TTCCTGCTGG CAAATACCCG TAATTTAGAC CGTGAACCTA TCGGCCTGAT GGATACTGTC
GCCACGGTCA CACCGGCACA ATTGCGCCAA TTTTATCAAC GCTGGTATCA ACCAAATAAT
ATGACCTTTA TCGTGGTCGG CGATATCGAC AGTAAAGAAG CGCTGGCGCT GATAAAGGAT
AATTTAAGTA AGCTTCCGGC TAACAAAGCA GCTGAAAATC GCGTCTGGCC GACAAAAGCC
GAAAACCACC TGCGCTTTAA TATCATTAAT GATAAAGAAA ACCGGGTGAA CGGCATCGCA
CTCTATTATC GCCTGCCAAT GGTACAAGTG AACGATGAGC AAAGCTTTGT CGAACAAGCT
GAATGGAGCA TGTTAGTTCA GCTGTTCAAT CAACGTCTGC AGGAACGCAT ACAGTCGGGC
GAGTTGAAGA CTATTTCTGG CGGCACTGCG CGCAGCGTTA AAATTGCACC CGATTATCAG
TCGCTGTTTT TCCGTGTAAA TGCACGAGAC GATAATATGC AGGATGCTGC GAATGCATTA
ATGGCAGAGT TGGCAACCAT TGATCAGCAT GGTTTTTCTG CTGAAGAACT CGATGATGTC
AAATCTACCC GCCTCACCTG GCTGAAAAAT GCGGTTGATC AGCAAGCTGA ACGTGATTTA
CGTATGCTGA CCAGTCGCCT GGCATCCAGC TCATTAAATA ATACGCCGTT CTTGTCGCCG
GAAGAGACAT ATCAACTTTC GAAACGTCTG TGGCAGCAAA TTACCGTGCA AAGTCTGGCG
GAAAAATGGC AGCAGTTAAG AAAGAACCAG GACGCATTTT GGGAGCAAAT GGTAAACAAT
GAGCTTGCCG CCAAAAAAGC ATTGTCTCCT GCGGCTATCC TGGCGCTGGA AAAAGAGTAC
GCCAACAAAA AGCTGGCGGC TTACATCTTC CCAGGCAGAA ATTTATCGTT AACAGTAGAC
GCTGACCCAC AGGCGGAAAT TAGCAGCAAA GAAACGCTGG CTGAGAATCT GACATCATTA
ACACTTTCCA ATGGTGCCAG GGTTATTCTG GCAAAATCCG CGGGTGAAGA GCAAAAGCTA
CAAATTACTG CCGTATCGAA TAAAGGCGAT TTAAGTTTCC CTGCGCAGCA AAAATCACTT
ATCGCGCTGG CAAATAAAGC AGTTAGCGGA AGCGGCGTTG GCGAACTCTC CTCTTCCAGC
CTGAAACGCT GGAGTGCGGA AAACTCGGTA ACCATGAGCA GTAAAGTCAG TGGCATGAAT
ACGTTGCTCT CCGTTAGCGC ACGGACTAAT AACCCTGAAC CTGGTTTTCA GTTGATTAAC
CAGCGAATCA CCCACAGCAC AATTAACGAC AATATTTGGG CATCGCTACA AAATGCTCAA
ATTCAGGCGT TGAAAACGCT CGACCAGCGT CCAGCGGAGA AATTCGCCCA GCAGATGTAT
GAGACGCGCT ATGCTGATGA CCGCACGAAA TTACTGCAAA AAAAACAGAT TGCACAGTTT
ACTGCCGCAG ATGCGCTGGC TGCCGATCGC CAGTTGTTTT CATCTCCAGC GGATATCACG
TTTGTCATTG TCGGTAATGT CTCAGAAGAC AAACTCGTGG CGTTAATTAC GCGTTACTTA
GGATCAATCA AACACTCTGA TTCGCCATTA GCCGCAGGTA AACCATTAAC TCGCGCGACG
GACAACGCAT CGGTTACTGT AAAAGAACAA AATGAACCTG TGGCACAGGT TTCACAGTGG
AAGCGTTATG ATTCCCGGAC ACCTGTTAAT CTGGCGACGC GTATGGCGCT CGATGCTTTT
AACGTCGCAC TGGCAAAAGA TCTACGTGTT AATATTCGTG AACAGGCATC TGGAGCATAC
AGCGTTTCTT CTCGCCTCTC GGTTGATCCT CAGGCCAAAG ATATCAGTCA TTTGCTGGCT
TTTACTTGTC AACCAGAACG ACATGATGAA CTGTTAACGT TAGCGAATGA AGTGATGGTT
AAGCGTCTGG CTAAAGGGAT CAGTGAGCAA GAACTGAATG AATACCAGCA AAACGTTCAG
CGCAGCCTCG ATATCCAACA GCGTAGCGTT CAACAATTAG CGAACACTAT TGTAAATAGT
CTTATTCAAT ATGACGATCC TGCAGCATGG ACTGAGCAGG AGCAATTGTT GAAACAAATG
ACGGTAGAGA ATGTTAACAC TGCCGTTAAA CAATATCTTT CTCATCCGGT AAATACTTAT
ACCGGAGTAT TATTGCCAAA ATAA
 
Protein sequence
MRNLCFLLTL VATLLLPGRL IAAALPQDEK LITGQLDNGL RYMIYPHAHP KDQVNLWLQI 
HTGSLQEEDN ERGVAHFVEH MMFNGTKTWP GNKVIETFES MGLRFGRDVN AYTSYDETVY
QVSLPTTQKQ NLQQVMAIFS EWSNAATFEK LEVDAERGVI TEEWRAHQDA KWRTSQARRP
FLLANTRNLD REPIGLMDTV ATVTPAQLRQ FYQRWYQPNN MTFIVVGDID SKEALALIKD
NLSKLPANKA AENRVWPTKA ENHLRFNIIN DKENRVNGIA LYYRLPMVQV NDEQSFVEQA
EWSMLVQLFN QRLQERIQSG ELKTISGGTA RSVKIAPDYQ SLFFRVNARD DNMQDAANAL
MAELATIDQH GFSAEELDDV KSTRLTWLKN AVDQQAERDL RMLTSRLASS SLNNTPFLSP
EETYQLSKRL WQQITVQSLA EKWQQLRKNQ DAFWEQMVNN ELAAKKALSP AAILALEKEY
ANKKLAAYIF PGRNLSLTVD ADPQAEISSK ETLAENLTSL TLSNGARVIL AKSAGEEQKL
QITAVSNKGD LSFPAQQKSL IALANKAVSG SGVGELSSSS LKRWSAENSV TMSSKVSGMN
TLLSVSARTN NPEPGFQLIN QRITHSTIND NIWASLQNAQ IQALKTLDQR PAEKFAQQMY
ETRYADDRTK LLQKKQIAQF TAADALAADR QLFSSPADIT FVIVGNVSED KLVALITRYL
GSIKHSDSPL AAGKPLTRAT DNASVTVKEQ NEPVAQVSQW KRYDSRTPVN LATRMALDAF
NVALAKDLRV NIREQASGAY SVSSRLSVDP QAKDISHLLA FTCQPERHDE LLTLANEVMV
KRLAKGISEQ ELNEYQQNVQ RSLDIQQRSV QQLANTIVNS LIQYDDPAAW TEQEQLLKQM
TVENVNTAVK QYLSHPVNTY TGVLLPK