| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2112 |
|---|
| Symbol | |
|---|
| ID | 6067134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 2308982 |
|---|
| End bp | 2309557 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641601520 |
|---|
| Product | tail assembly chaperone gp38 |
|---|
| Protein accession | YP_001725079 |
|---|
| Protein GI | 170020125 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5525] Bacteriophage tail assembly protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.012456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTCA GAATGAGTGA ACAACCACGG ACCATAAAAA TTTATAATCT GCTGGCCGGA
ACTAATGAAT TTATTGGTGA AGGTGACGCA TATATTCCGC CTCATACAGG TCTGCCAGCA
AACAGTATCG ATATTGCACC GCCAGATATT CCGGCAGGCT TCGTGGCTGT TTTCAACAGT
GATGAGGCAT CGTGGCATCT CGTTGAAGAT CATCGGGGTA AAACGGTTTA TGACGTGGCT
TCCGGCGACG CGTTATTTAT TTCTGAACTC GGTCCGTTAC CGGAAAATGT TACCTGGTTA
TCGCCGGGAG GGGAATATCA GAAGTGGAAC GGCACAGCCT GGGTGAAGGA TACGGAAGCA
GAAAAACTGT TCCGGATCCG GGAGGCGGAA GAAACAAAAA ACAGCCTGAT GCAGGTAGCC
AGTGAGCATA TTGCGCCGCT TCAGGATGCT GCAGATCTGG AAATTGCAAC GGAGGAAGAA
ATCTCGTTGC TGGAAGCATG GAAAAAGTAT CGGGTATTGC TGAACCGTGT TGATACGTCA
ACTGCACAGG ATATTGAATG GCCAGCACTG CCGTAG
|
|---|
| Protein sequence | MAFRMSEQPR TIKIYNLLAG TNEFIGEGDA YIPPHTGLPA NSIDIAPPDI PAGFVAVFNS
DEASWHLVED HRGKTVYDVA SGDALFISEL GPLPENVTWL SPGGEYQKWN GTAWVKDTEA
EKLFRIREAE ETKNSLMQVA SEHIAPLQDA ADLEIATEEE ISLLEAWKKY RVLLNRVDTS
TAQDIEWPAL P
|
|---|
| |