| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2108 |
|---|
| Symbol | |
|---|
| ID | 6067206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 2301115 |
|---|
| End bp | 2301687 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641601516 |
|---|
| Product | lambda tail assembly I |
|---|
| Protein accession | YP_001725075 |
|---|
| Protein GI | 170020121 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4723] Phage-related protein, tail component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000153192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAACGG GGGCTGAAGC CATCCGCGCA CTGGCCACAC AGCTCCCGGC GTTTCGTCAG
AAACTGAGCG ACGGCTGGTA TCAGGTACGG ATTGCCGGGC GGGACGTCAG CACGTCCGGG
TTAACGGCGC AGTTACATGA GACTCTGCCT GACGGCGCTG TGATTCATAT TGTTCCCAGA
GTCGCCGGGG CCAAGTCAGG GGGCGTATTC CAGATTGTTC TGGGGGCTGC CGCCATTGCC
GGATCATTCT TTACTGCCGG AGCCACTCTT GCAGCATGGG GGGCAGCCAT TGGGGCCGGT
GGTATGACCG GTATCCTGTT TTCTCTCGGT GCCAGTATGG TACTTGGTGG TGTGGCGCAG
ATGCTGGCAC CGAAAGCCAG GACGCCCACG GCAGCAAGTA CAGATAACGG CAAACAGAAC
ACCTATTTCT CCTCACTGGA TAACATGGTT GCCCAGGGCA ATGTTCTGCC CGTTCTGTAC
GGTGAAATGC GCGTGGGGTC GCGGGTGGTC TCTCAGGAGA TCAGCACGGC AGACGAAGGG
GATGGTGGTC AGGTTGTGGT GATTGGTCGC TGA
|
|---|
| Protein sequence | MKTGAEAIRA LATQLPAFRQ KLSDGWYQVR IAGRDVSTSG LTAQLHETLP DGAVIHIVPR
VAGAKSGGVF QIVLGAAAIA GSFFTAGATL AAWGAAIGAG GMTGILFSLG ASMVLGGVAQ
MLAPKARTPT AASTDNGKQN TYFSSLDNMV AQGNVLPVLY GEMRVGSRVV SQEISTADEG
DGGQVVVIGR
|
|---|
| |