Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2101 |
Symbol | |
ID | 6067247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 2295197 |
End bp | 2295937 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641601509 |
Product | Ig domain-containing protein |
Protein accession | YP_001725068 |
Protein GI | 170020114 |
COG category | [N] Cell motility |
COG ID | [COG5492] Bacterial surface proteins containing Ig-like domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000111932 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGTAC CAAATCCAGT AATGCCGGTG AAAGGGGCCG GGACCACACT GTGGGTTTAT AAGGGGAACG GTGACCCTTA TGCGAACCCG CTTTCAGACG TTGACTGGTC GCGTCTGGCT AAAGTTAAAG ACCTGACGCC CGGCGAACTG ACCGCTGAGT CCTATGACGA CAGCTATCTC GATGATGAAG ATGCGGACTG GACTGCGACC GGGCAGGGGC AGAAATCTGC CGGAGATACC AGCTTCACGC TGGCGTGGAT GCCCGGAGAG CAGGGGCAGC AGGCGCTGCT GGCGTGGTTT AATGAAGGGG ATACCCGTGC CTATAAAATC CGCTTCCCGA ACGGCACGGT CGATGTGTTC CGCGGCTGGG TCAGCAGTAT CGGTAAGGCG GTGACGGCGA AGGAAGTGAT CACCCGCACG GTGAAAGTCA CCAACGTGAG ACGTCCGTCG ATGGCAGAAG ATCGCAGCAC GGTAACAGCG GCAACCGGCA TGACCGTGAC GCCTGCCAGC ACTTCGGTGG TGAAAGGGCA GAGCACCACG CTGACCGTGG CATTCCAGCC GGAAGGCGCA ACCGACAAGA GCTTCCGTGC GGTGTCTGCG GATAAAACAA AAGCCACCGT GTCGGTCAGT GGTATGACCA TCACCGTGAA AGGTGTTGCT GCAGGCAAGG TCAACATTCC GGTTGTATCC GGTAATGGTG AACTTGCTGT GGTTGCAGAA ATCACCGTCA CCGACAGTTA A
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Protein sequence | MPVPNPVMPV KGAGTTLWVY KGNGDPYANP LSDVDWSRLA KVKDLTPGEL TAESYDDSYL DDEDADWTAT GQGQKSAGDT SFTLAWMPGE QGQQALLAWF NEGDTRAYKI RFPNGTVDVF RGWVSSIGKA VTAKEVITRT VKVTNVRRPS MAEDRSTVTA ATGMTVTPAS TSVVKGQSTT LTVAFQPEGA TDKSFRAVSA DKTKATVSVS GMTITVKGVA AGKVNIPVVS GNGELAVVAE ITVTDS
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