Gene EcolC_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2027 
SymbolpntA 
ID6067915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2238589 
End bp2240121 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content52% 
IMG OID641601439 
ProductNAD(P) transhydrogenase subunit alpha 
Protein accessionYP_001724998 
Protein GI170020044 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID[TIGR00561] NAD(P) transhydrogenase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.788341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTG GCATACCAAG AGAACGGTTA ACCAATGAAA CCCGTGTTGC AGCAACGCCA 
AAAACAGTGG AACAGCTGCT GAAACTGGGT TTTACCGTCG CGGTAGAGAG CGGCGCGGGT
CAACTGGCAA GTTTTGACGA TAAAGCGTTT GTGCAAGCGG GCGCTGAAAT TGTAGAAGGG
AATAGCGTCT GGCAGTCAGA GATCATTCTG AAGGTCAATG CGCCGTTAGA TGATGAAATT
GCGTTACTGA ATCCTGGGAC AACGCTGGTG AGTTTTATCT GGCCTGCGCA GAATCCGGAA
TTAATGCAAA AACTTGCGGA ACGTAACGTG ACCGTGATGG CGATGGACTC TGTGCCGCGT
ATCTCACGCG CACAATCGCT GGACGCACTA AGCTCGATGG CGAACATCGC CGGTTATCGC
GCCATTGTTG AAGCGGCACA TGAATTTGGG CGCTTCTTTA CCGGGCAAAT TACTGCGGCC
GGGAAAGTGC CACCGGCAAA AGTGATGGTG ATTGGTGCGG GTGTTGCAGG TCTGGCCGCC
ATTGGCGCAG CAAACAGTCT CGGCGCGATT GTGCGTGCAT TCGACACCCG CCCGGAAGTG
AAAGAACAAG TTCAAAGTAT GGGCGCGGAA TTCCTCGAGC TGGATTTTAA AGAGGAAGCT
GGCAGCGGCG ATGGCTATGC CAAAGTGATG TCGGACGCGT TCATCAAAGC GGAAATGGAA
CTCTTTGCCG CCCAGGCAAA AGAGGTCGAT ATCATTGTCA CCACCGCGCT TATTCCAGGC
AAACCAGCGC CGAAGCTAAT TACCCGTGAA ATGGTTGACT CCATGAAGGC GGGCAGTGTG
ATTGTCGACC TGGCAGCCCA AAACGGCGGC AACTGTGAAT ACACCGTGCC GGGTGAAATC
TTCACTACGG AAAATGGTGT CAAAGTGATT GGTTATACCG ATCTTCCGGG CCGTCTGCCG
ACGCAATCCT CACAGCTTTA CGGCACAAAC CTCGTTAATC TGCTGAAACT GTTGTGCAAA
GAGAAAGACG GCAATATCAC TGTTGATTTT GATGATGTGG TGATTCGCGG CGTGACCGTG
ATCCGTGCGG GCGAAATTAC CTGGCCGGCA CCGCCGATTC AGGTATCAGC TCAGCCGCAG
GCGGCACAAA AAGCGGCACC GGAAGTGAAA ACTGAGGAAA AATGTACCTG CTCACCGTGG
CGTAAATACG CGTTGATGGC GCTGGCAATC ATTCTTTTTG GCTGGATGGC AAGCGTTGCG
CCGAAAGAAT TCCTTGGGCA CTTCACCGTT TTCGCGCTGG CCTGCGTTGT CGGTTATTAC
GTGGTGTGGA ATGTATCGCA CGCGCTGCAT ACACCGTTGA TGTCGGTCAC CAACGCGATT
TCAGGGATTA TTGTTGTCGG AGCACTGTTG CAGATTGGCC AGGGCGGCTG GGTTAGCTTC
CTTAGTTTTA TCGCGGTGCT TATAGCCAGC ATTAATATTT TCGGTGGCTT CACCGTGACT
CAGCGCATGC TGAAAATGTT CCGCAAAAAT TAA
 
Protein sequence
MRIGIPRERL TNETRVAATP KTVEQLLKLG FTVAVESGAG QLASFDDKAF VQAGAEIVEG 
NSVWQSEIIL KVNAPLDDEI ALLNPGTTLV SFIWPAQNPE LMQKLAERNV TVMAMDSVPR
ISRAQSLDAL SSMANIAGYR AIVEAAHEFG RFFTGQITAA GKVPPAKVMV IGAGVAGLAA
IGAANSLGAI VRAFDTRPEV KEQVQSMGAE FLELDFKEEA GSGDGYAKVM SDAFIKAEME
LFAAQAKEVD IIVTTALIPG KPAPKLITRE MVDSMKAGSV IVDLAAQNGG NCEYTVPGEI
FTTENGVKVI GYTDLPGRLP TQSSQLYGTN LVNLLKLLCK EKDGNITVDF DDVVIRGVTV
IRAGEITWPA PPIQVSAQPQ AAQKAAPEVK TEEKCTCSPW RKYALMALAI ILFGWMASVA
PKEFLGHFTV FALACVVGYY VVWNVSHALH TPLMSVTNAI SGIIVVGALL QIGQGGWVSF
LSFIAVLIAS INIFGGFTVT QRMLKMFRKN