| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2011 |
|---|
| Symbol | |
|---|
| ID | 6068056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 2218634 |
|---|
| End bp | 2219401 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641601424 |
|---|
| Product | 7-alpha-hydroxysteroid dehydrogenase |
|---|
| Protein accession | YP_001724983 |
|---|
| Protein GI | 170020029 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.617976 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.65251 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTAATT CTGACAACCT GAGACTCGAC GGAAAATGCG CCATCATCAC AGGTGCGGGT
GCAGGTATTG GTAAAGAAAT CGCCATTACA TTCGCGACAG CTGGCGCATC TGTGGTGGTC
AGTGATATTA ACGCCGACGC AGCTAACCAT GTTGTAGACG AAATTCAACA ACTGGGTGGT
CAGGCATTTG CCTGCCGTTG TGATATTACT TCCGAACAGG AACTCTCTGC ACTGGCAGAC
TTTGCTATCA GTAAGCTGGG TAAAGTTGAT ATTCTGGTTA ACAACGCCGG TGGCGGTGGA
CCTAAACCGT TTGATATGCC AATGGCGGAT TTTCGCCGTG CTTATGAACT GAATGTGTTT
TCTTTTTTCC ATCTGTCACA ACTTGTTGCG CCAGAAATGG AAAAAAATGG CGGTGGCGTT
ATTCTGACCA TCACTTCTAT GGCGGCAGAA AATAAAAATA TAAACATGAC TTCCTATGCA
TCATCTAAAG CTGCGGCCAG TCATCTGGTC AGAAATATGG CGTTTGACCT GGGTGAAAAA
AATATTCGGG TAAATGGCAT TGCGCCGGGG GCAATATTAA CCGATGCCCT GAAATCCGTT
ATTACACCAG AAATTGAACA AAAAATGTTA CAGCACACGC CGATCAGACG TCTGGGCCAA
CCGCAAGATA TTGCTAACGC AGCGCTGTTC CTTTGCTCGC CTGCTGCGAG CTGGGTAAGC
GGACAAATTC TCACCGTCTC CGGTGGTGGG GTACAGGAGC TCAATTAA
|
|---|
| Protein sequence | MFNSDNLRLD GKCAIITGAG AGIGKEIAIT FATAGASVVV SDINADAANH VVDEIQQLGG
QAFACRCDIT SEQELSALAD FAISKLGKVD ILVNNAGGGG PKPFDMPMAD FRRAYELNVF
SFFHLSQLVA PEMEKNGGGV ILTITSMAAE NKNINMTSYA SSKAAASHLV RNMAFDLGEK
NIRVNGIAPG AILTDALKSV ITPEIEQKML QHTPIRRLGQ PQDIANAALF LCSPAASWVS
GQILTVSGGG VQELN
|
|---|
| |