Gene EcolC_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2010 
Symbol 
ID6068064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2217494 
End bp2218522 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content54% 
IMG OID641601423 
ProductDNA-binding transcriptional repressor MalI 
Protein accessionYP_001724982 
Protein GI170020028 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0616401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.708853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCG CCAAAAAAAT AACCATTCAT GATGTTGCGC TGGCTGCGGG CGTGTCGGTA 
AGTACCGTTT CGCTGGTGCT TAGTGGCAAA GGGCGAATCT CTACCGCCAC AGGAGAACGC
GTTAACGCCG CCATTGAAGA GCTGGGATTT GTGCGCAATC GCCAGGCGTC GGCGCTGCGC
GGCGGGCAAA GCGGCGTCAT TGGTTTGATC GTCCGTGATT TATCTGCGCC GTTTTACGCC
GAATTGACGG CCGGATTGAC GGAAGCTCTG GAAGCGCAGG GACGGATGGT TTTTTTGCTT
CACGGCGGTA AAGACGGTGA GCAGCTGGCA CAGCGGTTTT CACTGTTACT GAATCAGGGT
GTCGATGGTG TGGTAATTGC CGGAGCTGCA GGAAGTAGCG ATGACCTGCG ACGGATGGCA
GAAGAAAAAG CTATCCCGGT GATTTTCGCT TCCCGTGCCA GTTATCTTGA TGATGTTGAT
ACGGTTCGCC CGGACAACAT GCAGGCTGCA CAGTTGTTGA CGGAGCATCT CATTCGCAAT
GGGCATCAGC GGATCGCCTG GCTGGGAGGG CAAAGTTCCT CATTAACCCG TGCAGAACGG
GTTGGGGGCT ATTGTGCAAC TCTACTAAAA TTTGGCCTGC CGTTTCATAG CGATTGGGTG
TTGGAGTGCA CTTCCAGCCA GAAGCAAGCC GCGGAAGCTA TCACGGCGCT TTTACGTCAT
AACCCGACCA TCAGTGCCGT GGTTTGCTAT AACGAAACTA TTGCGATGGG GGCATGGTTT
GGTTTGCTCA AAGCAGGGCG GCAAAGCGGG GAAAGCGGAG TCGATCGTTA CTTTGAGCAA
CAGGTTTCGC TGGCGGCATT TACCGATGCG ACACCAACCA CACTTGATGA TATACCTGTT
ACCTGGGCCA GCACGCCAGC GCGGGAACTT GGTATCACAC TTGCGGATCG CATGATGCAA
AAAATCACCC ATGAAGAGAC GCATTCACGC AATCTTATTA TTCCCGCCCG GCTCATTGCA
GCGAAATAA
 
Protein sequence
MATAKKITIH DVALAAGVSV STVSLVLSGK GRISTATGER VNAAIEELGF VRNRQASALR 
GGQSGVIGLI VRDLSAPFYA ELTAGLTEAL EAQGRMVFLL HGGKDGEQLA QRFSLLLNQG
VDGVVIAGAA GSSDDLRRMA EEKAIPVIFA SRASYLDDVD TVRPDNMQAA QLLTEHLIRN
GHQRIAWLGG QSSSLTRAER VGGYCATLLK FGLPFHSDWV LECTSSQKQA AEAITALLRH
NPTISAVVCY NETIAMGAWF GLLKAGRQSG ESGVDRYFEQ QVSLAAFTDA TPTTLDDIPV
TWASTPAREL GITLADRMMQ KITHEETHSR NLIIPARLIA AK