Gene EcolC_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1990 
Symbol 
ID6068160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2198286 
End bp2198609 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content46% 
IMG OID641601404 
Productlysozyme inhibitor 
Protein accessionYP_001724963 
Protein GI170020009 
COG category[R] General function prediction only 
COG ID[COG3895] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00364612 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAC TGTTAATTAT CATTTTGCCG GTCCTTCTCT CCGGCTGTAG CGCCTTTAAT 
CAGCTGGTTG AGCGCATGCA AACCGATACG CTGGAATACC AGTGTGATGA AAAACCGTTG
ACGGTCAAAC TGAATAATCC GCGCCAGGAG GTCAGTTTTG TTTACGATAA TCAACTACTG
CATCTCAAAC AGGGCATTTC AGCCTCTGGC GCGCGTTACA CTGACGGAAT CTATGTTTTC
TGGTCGAAAG GCGATGAAGC GACTGTCTAT AAACGCGACC GCATCGTCTT GAATAACTGT
CAGTTACAAA ATCCACAGCG TTGA
 
Protein sequence
MKKLLIIILP VLLSGCSAFN QLVERMQTDT LEYQCDEKPL TVKLNNPRQE VSFVYDNQLL 
HLKQGISASG ARYTDGIYVF WSKGDEATVY KRDRIVLNNC QLQNPQR