Gene EcolC_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1978 
Symbol 
ID6068195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2188431 
End bp2188838 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content51% 
IMG OID641601392 
Productglyoxalase I 
Protein accessionYP_001724951 
Protein GI170019997 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID[TIGR00068] lactoylglutathione lyase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.077498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00100198 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTCTTC TTCATACCAT GCTGCGCGTT GGCGATTTGC AACGCTCCAT CGATTTTTAT 
ACCAAAGTGC TGGGCATGAA ACTGCTGCGT ACCAGCGAAA ACCCGGAATA CAAATACTCA
CTGGCGTTTG TTGGCTACGG CCCGGAAACC GAAGAAGCGG TGATTGAACT GACCTACAAC
TGGGGCGTGG ATAAATACGA ACTCGGCACT GCTTATGGTC ACATCGCGCT TAGCGTAGAT
AACGCCGCTG AAGCGTGCGA AAAAATCCGT CAAAACGGGG GTAACGTGAC CCGTGAAGCG
GGTCCGGTAA AAGGCGGTAC TACGGTTATC GCGTTTGTGG AAGATCCGGA CGGTTACAAA
ATTGAGTTAA TCGAAGAGAA AGACGCCGGT CGCGGTCTGG GCAACTAA
 
Protein sequence
MRLLHTMLRV GDLQRSIDFY TKVLGMKLLR TSENPEYKYS LAFVGYGPET EEAVIELTYN 
WGVDKYELGT AYGHIALSVD NAAEACEKIR QNGGNVTREA GPVKGGTTVI AFVEDPDGYK
IELIEEKDAG RGLGN