| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1969 |
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| Symbol | |
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| ID | 6068231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 2175569 |
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| End bp | 2176780 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641601383 |
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| Product | inner membrane transport protein YdhC |
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| Protein accession | YP_001724942 |
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| Protein GI | 170019988 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000225757 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACCTG GGAAAAGATT TTTAGTCTGG CTGGCGGGTT TGAGCGTACT CGGTTTTCTG
GCAACCGATA TGTATCTGCC TGCTTTCGCC GCCATACAGG CCGACCTGCA AACGCCTGCG
TCTGCTGTCA GTGCCAGCCT TAGTCTGTTC CTTGCCGGTT TTGCCGCAGC CCAGCTTCTG
TGGGGGCCAC TCTCCGACCG TTATGGTCGT AAACCGGTGT TATTAATCGG CCTGACAATT
TTTGCGTTAG GTAGTCTGGG GATGCTGTGG GTAGAAAACG CCGCCACGCT GCTGGTATTG
CGTTTTGTAC AGGCTGTGGG GGTCTGCGCC GCGGCGGTTA TCTGGCAAGC ATTAGTGACA
GATTATTATC CTTCACAGAA AGTCAACCGT ATTTTTGCGA CCATCATGCC GCTGGTGGGT
CTGTCTCCGG CACTTGCTCC CCTGTTAGGA AGCTGGCTGC TGGTCCATTT TTCCTGGCAG
GCGATTTTCG CCACCCTGTT TGCCATTACC GTGGTGCTGA TTCTGCCTAT TTTCTGGCTC
AAACCCACGA CGAAGGCCCG TAACAATAGT CAGGATGGTC TGACCTTTAC CGACCTGCTA
CGTTCTAAAA CCTATCGCGG CAACGTGCTG ATATATGCGG CCTGTTCAGC CAGTTTTTTT
GCATGGCTGA CCGGTTCACC GTTCATCCTT AGTGAAATGG GCTACAGCCC GGCAGTTATT
GGTTTAAGTT ATGTCCCGCA AACTATCGCG TTTCTGATTG GTGGTTATGG CTGTCGCGCC
GCACTGCAGA AATGGCAAGG CAAGCAGTTA TTACCGTGGT TGCTGGTGCT GTTTGCTGTC
AGCGTCATTG CGACCTGGGC TGCAGGCTTC ATTAGCCATG TGTCGCTGGT CGAAATCCTG
ATCCCATTCT GTGTGATGGC GATTGCCAAT GGCGCGATCT ACCCTATTGT TGTCGCCCAG
GCGCTGCGTC CCTTCCCACA CGCAACTGGT CGCGCCGCAG CTTTGCAGAA CACTCTACAA
CTGGGTCTGT GCTTCCTCGC AAGTCTGGTA GTTTCCTGGC TGATCAGTAT CAGCACGCCA
TTGCTCACCA CCACCAGCGT GATGTTATCA ACAGTAGTGC TGGTCGCGCT GGGTTACATG
ATGCAACGTT GTGAAGAAGT TGGCTGCCAG AATCATGGCA ATGCCGAAGT CGCTCATAGC
GAATCACACT GA
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| Protein sequence | MQPGKRFLVW LAGLSVLGFL ATDMYLPAFA AIQADLQTPA SAVSASLSLF LAGFAAAQLL
WGPLSDRYGR KPVLLIGLTI FALGSLGMLW VENAATLLVL RFVQAVGVCA AAVIWQALVT
DYYPSQKVNR IFATIMPLVG LSPALAPLLG SWLLVHFSWQ AIFATLFAIT VVLILPIFWL
KPTTKARNNS QDGLTFTDLL RSKTYRGNVL IYAACSASFF AWLTGSPFIL SEMGYSPAVI
GLSYVPQTIA FLIGGYGCRA ALQKWQGKQL LPWLLVLFAV SVIATWAAGF ISHVSLVEIL
IPFCVMAIAN GAIYPIVVAQ ALRPFPHATG RAAALQNTLQ LGLCFLASLV VSWLISISTP
LLTTTSVMLS TVVLVALGYM MQRCEEVGCQ NHGNAEVAHS ESH
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