Gene EcolC_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1967 
Symbol 
ID6068242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand+ 
Start bp2173449 
End bp2174090 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content48% 
IMG OID641601381 
Productriboflavin synthase subunit alpha 
Protein accessionYP_001724940 
Protein GI170019986 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.756733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.00000222488 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTACGG GGATTGTACA GGGCACCGCA AAACTGGTGT CGATTGACGA GAAACCAAAT 
TTTCGTACGC ATGTGGTGGA GTTACCCGAC CACATGCTGG ACGGCCTGGA AACCGGTGCG 
TCCGTGGCGC ATAACGGTTG CTGCCTGACC GTGACGGAAA TTAACGGCAA CCATGTCAGT 
TTTGACCTGA TGAAAGAAAC GTTACGCATT ACCAATCTTG GCGATTTAAA AGTGGGGGAT 
TGGGTAAACG TTGAGCGTGC GGCGAAATTC AGTGATGAAA TTGGCGGACA CTTAATGTCA 
GGTCATATTA TGACCACCGC TGAAGTGGCG AAAATATTAA CCTCGGAAAA TAATCGCCAG 
ATCTGGTTTA AAGTCCAGGA TAGTCAGTTG ATGAAATATA TTCTGTACAA AGGATTTATT 
GGCATCGACG GTATTAGCCT GACCGTCGGC GAAGTCACGC CAACGCGTTT TTGCGTCCAT 
TTAATTCCGG AAACACTGGA ACGCACGACT CTTGGGAAGA AAAAACTTGG CGCACGCGTC 
AACATTGAAA TCGATCCACA AACTCAGGCA GTGGTAGATA CGGTAGAACG TGTGCTGGCG 
GCACGAGAAA ATGCCATGAA TCAACCAGGT ACAGAAGCCT GA
 
Protein sequence
MFTGIVQGTA KLVSIDEKPN FRTHVVELPD HMLDGLETGA SVAHNGCCLT VTEINGNHVS 
FDLMKETLRI TNLGDLKVGD WVNVERAAKF SDEIGGHLMS GHIMTTAEVA KILTSENNRQ 
IWFKVQDSQL MKYILYKGFI GIDGISLTVG EVTPTRFCVH LIPETLERTT LGKKKLGARV 
NIEIDPQTQA VVDTVERVLA ARENAMNQPG TEA