Gene EcolC_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1961 
Symbol 
ID6068333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2166343 
End bp2167128 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content49% 
IMG OID641601373 
Productcytochrome B561 
Protein accessionYP_001724934 
Protein GI170019980 
COG category[C] Energy production and conversion 
COG ID[COG4117] Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000190116 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCCGT CGCAACATGC TGAACAGTTT CAGAGCCAGT TAGCGAACTA TGTGCCACAG 
TTCACTCCCG AATTTTGGCC GGTGTGGTTG ATCATTGCCG GAGTATTGCT GGTTGGGATG
TGGTTGGTGC TGGGGCTGCA CGCCTTGCTT CGTGCTCGTG GCGTGAAGAA ATCAGCCACC
GATCATGGTG AGAAGGTTTA TCTTTACAGC AAAGCGGTCA GATTATGGCA CTGGTCGAAT
GCGTTACTCT TTGTATTGTT GCTGGCAAGT GGGCTGATAA ATCACTTTGC GATGGTGGGC
GCAACTGCGG TTAAAAGTCT GGTTGCGGTG CATGAAGTTT GCGGATTTTT GTTACTGGCA
TGCTGGCTCG GCTTTGTGCT GATCAATGCC GTTGGGGATA ATGGTCACCA CTATCGCATT
CGTCGTCAGG GGTGGCTGGA ACGAGCGGCA AAACAAACGC GATTTTATTT GTTTGGCATT
ATGCAGGGGG AAGAACATCC TTTACCGGCA ACAACACAGT CTAAATTTAA TCCCTTACAG
CAGGTCGCCT ATGTTGGTGT CATGTATGGA TTGCTGCCGT TGTTACTATT GACGGGGCTG
TTGTGTCTCT ATCCGCAAGC CGTGGGAGAT GTGTTTCCTG GCGTAAGATA CTGGTTATTG
CAGGCGCATT TTGCTCTGGC ATTTATAAGC CTCTTTTTTA TCTTCGGTCA TCTTTATCTT
TGCACCACGG GGCGTACGCC ACACGAAACC TTTAAAAGCA TGGTCGATGG CTATCACCGG
CACTAA
 
Protein sequence
MNPSQHAEQF QSQLANYVPQ FTPEFWPVWL IIAGVLLVGM WLVLGLHALL RARGVKKSAT 
DHGEKVYLYS KAVRLWHWSN ALLFVLLLAS GLINHFAMVG ATAVKSLVAV HEVCGFLLLA
CWLGFVLINA VGDNGHHYRI RRQGWLERAA KQTRFYLFGI MQGEEHPLPA TTQSKFNPLQ
QVAYVGVMYG LLPLLLLTGL LCLYPQAVGD VFPGVRYWLL QAHFALAFIS LFFIFGHLYL
CTTGRTPHET FKSMVDGYHR H