Gene EcolC_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1928 
Symbol 
ID6068648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2128411 
End bp2129244 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content51% 
IMG OID641601339 
Producthypothetical protein 
Protein accessionYP_001724901 
Protein GI170019947 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.868856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.230597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATG CTGTTGATCG CCACGTTTTT TATATTTCTG ATGGTACGGC AATAACTGCG 
GAGGTATTAG GACACGCAGT AATGTCACAA TTTCCCGTCA CTATCAGCAG CATTACGCTG
CCGTTTGTCG AAAATGAGAG CCGTGCACGG GCAGTGAAGG ATCAGATTGA CGCAATTTAT
CACCAGACAG GCGTGCGCCC GCTGGTCTTC TACTCCATCG TGTTGCCGGA GATTCGCGCC
ATCATCTTGC AAAGTGAAGG CTTTTGCCAG GATATCGTTC AGGCGCTGGT TGCCCCGCTA
CAACAAGAGA TGAAACTGGA TCCAACGCCG ATTGCTCATC GTACCCATGG CCTTAACCCT
AATAATCTCA ATAAATATGA TGCGCGCATT GCGGCGATTG ATTACACCCT CGCCCACGAT
GACGGCATTT CGTTGCGCAA TCTGGATCAG GCTCAGGTGA TCCTGCTCGG TGTTTCTCGC
TGTGGTAAAA CCCCCACCAG TCTGTATCTG GCAATGCAAT TTGGTATCCG CGCGGCAAAC
TACCCCTTTA TTGCCGACGA TATGGATAAT CTGGTGCTAC CCGCGTCGCT CAAACCGCTT
CAGCATAAAT TGTTCGGCCT GACTATAGAC CCGGAACGTC TGGCGGCGAT TCGCGAGGAA
CGTCGGGAGA ACAGCCGCTA TGCCTCGCTT CGTCAGTGCA GGATGGAAGT CGCGGAAGTA
GAAGCGTTGT ACCGTAAAAA TCAGATCCCG TGGATTAACA GTACCAATTA TTCGGTAGAA
GAGATTGCCA CCAAGATCCT CGATATCATG GGGCTTAGCC GCCGAATGTA CTAG
 
Protein sequence
MDNAVDRHVF YISDGTAITA EVLGHAVMSQ FPVTISSITL PFVENESRAR AVKDQIDAIY 
HQTGVRPLVF YSIVLPEIRA IILQSEGFCQ DIVQALVAPL QQEMKLDPTP IAHRTHGLNP
NNLNKYDARI AAIDYTLAHD DGISLRNLDQ AQVILLGVSR CGKTPTSLYL AMQFGIRAAN
YPFIADDMDN LVLPASLKPL QHKLFGLTID PERLAAIREE RRENSRYASL RQCRMEVAEV
EALYRKNQIP WINSTNYSVE EIATKILDIM GLSRRMY