| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1922 |
|---|
| Symbol | |
|---|
| ID | 6068687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 2123131 |
|---|
| End bp | 2123880 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641601333 |
|---|
| Product | vitamin B12-transporter ATPase |
|---|
| Protein accession | YP_001724895 |
|---|
| Protein GI | 170019941 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4138] ABC-type cobalamin transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.476503 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATTG TGATGCAGTT ACAAGATGTT GCGGAATCTA CCCGCCTGGG GCCGCTTTCT
GGCGAGGTTC GGGCTGGGGA GATCCTGCAC CTGGTGGGGC CGAATGGCGC GGGTAAGAGT
ACCTTACTGG CGCGAATGGC CGGAATGACC AGCGGTAAGG GAAGCATTCA GTTCGCGGGG
CAACCACTGG AAGCATGGTC CGCAACAAAA CTCGCGCTGC ATCGCGCCTA TCTTTCACAA
CAGCAGACGC CGCCGTTTGC AATGCCGGTC TGGCACTACC TGACACTGCA TCAGCACGAT
AAAACGCGTA CCGAACTACT GAATGATGTC GCAGGGGCGC TGGCTCTTGA TGACAAACTC
GGACGTAGCA CCAATCAACT TTCCGGCGGT GAATGGCAAC GCGTACGTCT TGCTGCGGTG
GTGTTGCAAA TCACACCACA AGCCAATCCC GCAGGCCAAT TGCTGCTTCT TGATGAGCCG
ATGAACAGTC TTGATGTTGC GCAACAAAGT GCGTTAGACA AAATTCTGAG CGCGCTGTGT
CAGCAAGGAC TGGCGATTGT GATGAGCAGT CACGATCTCA ACCACACATT GCGTCATGCG
CATCGGGCGT GGTTGCTAAA AGGTGGAAAA ATGCTGGCCA GTGGACGCAG GGAAGAGGTG
CTCACGCCGC CAAATCTGGC GCAGGCCTAT GGGATGAATT TTCGCCGTCT GGATATCGAA
GGTCACAGAA TGCTGATTTC GACCATCTGA
|
|---|
| Protein sequence | MSIVMQLQDV AESTRLGPLS GEVRAGEILH LVGPNGAGKS TLLARMAGMT SGKGSIQFAG
QPLEAWSATK LALHRAYLSQ QQTPPFAMPV WHYLTLHQHD KTRTELLNDV AGALALDDKL
GRSTNQLSGG EWQRVRLAAV VLQITPQANP AGQLLLLDEP MNSLDVAQQS ALDKILSALC
QQGLAIVMSS HDLNHTLRHA HRAWLLKGGK MLASGRREEV LTPPNLAQAY GMNFRRLDIE
GHRMLISTI
|
|---|
| |