Gene EcolC_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1897 
Symbol 
ID6064703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2097246 
End bp2098085 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content42% 
IMG OID641601310 
ProductDNA-binding transcriptional regulator ChbR 
Protein accessionYP_001724872 
Protein GI170019918 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.737431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.387468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCAG TGATTAACGC GCCGGAAATT GCCACTGCCC GAGAACAGCA GTTGTTTAAT 
GGCAAAAACT TCCATGTGTT TATCTATAAC AAAACTGAGA GTATCAGCGG ACTGCATCAG
CACGACTATT ATGAATTTAC TCTGGTATTA ACCGGGCGTT ATTTCCAGGA GATTAACGGT
AAGCGCGTGT TACTGGAACG GGGTGATTTT GTTTTTATTC CGTTAGGTTC GCACCATCAA
AGTTTCTATG AGTTTGGTGC CACGCGTATA TTGAACGTTG GGATCAGTAA ACGCTTTTTT
GAGCAGCATT ACCTGCCGTT GTTGCCTTAT TGCTTTGTAG CTTCGCAGGT ATACCGGACC
AACAACGCTT TTCTCACCTA TGTGGAAACA GTGATTTCTT CATTGAATTT CCGCGAAACA
GGGCTGGAAG AGTTTGTTGA GATGGTTACT TTTTATGTCA TTAACCGTTT ACGTCATTAC
CGCGAAGAAC AGGTGATTGA TGATGTACCG CAGTGGCTGA AAAGTACGGT AGAAAAGATG
CATGATAAAG AGCAGTTTAG TGAATCGGCG CTGGAGAATA TGGTGACGTT GTCAGCCAAA
TCACAGGAAT ATTTGACGCG GGCGACTCAA CGATATTATG GCAAAACGCC AATGCAGATT
ATTAATGAAA TCCGTATTAA TTTTGCCAAA AAACAACTGG AAATGACCAA CTATTCAGTG
ACGGATATTG CGTTTGAGGC CGGTTATAGT AGCCCGAGTT TGTTTATTAA AACGTTTAAG
AAATTAACGT CCTTTACGCC TAAGAGCTAT CGTAAGAAAT TGACTGAATT TAATCAGTAA
 
Protein sequence
MQPVINAPEI ATAREQQLFN GKNFHVFIYN KTESISGLHQ HDYYEFTLVL TGRYFQEING 
KRVLLERGDF VFIPLGSHHQ SFYEFGATRI LNVGISKRFF EQHYLPLLPY CFVASQVYRT
NNAFLTYVET VISSLNFRET GLEEFVEMVT FYVINRLRHY REEQVIDDVP QWLKSTVEKM
HDKEQFSESA LENMVTLSAK SQEYLTRATQ RYYGKTPMQI INEIRINFAK KQLEMTNYSV
TDIAFEAGYS SPSLFIKTFK KLTSFTPKSY RKKLTEFNQ